| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0162 |
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| Symbol | |
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| ID | 5296688 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | + |
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| Start bp | 173797 |
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| End bp | 174447 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 640768419 |
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| Product | 50S ribosomal protein L25/general stress protein Ctc |
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| Protein accession | YP_001305424 |
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| Protein GI | 150020070 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1825] Ribosomal protein L25 (general stress protein Ctc) |
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| TIGRFAM ID | [TIGR00731] ribosomal protein L25, Ctc-form |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.875628 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCACAAC ACAAGCTAGA GGCCCTGACG AGAAACGTTG TTGGAAAAAA AAGGGCTGTT
AGAAGATTGA GAAAACAAGG ACTTATACCC GGTGTAGTTT ATGGGCCTGA TATTGAACCA
CTTTCTATTT CAATTAAAAA GTCCAATTTA ATCAAGCTTT TATACGAAGT AACCGAAGCA
AGCATTATTT CACTTTCCGT TAAAGATGAA ACAGGAAATG AGGTATTCTC TCACGATGTA
TTCATTAAAA ACATTCAATA CGATAAATTA ACAGATGAAG TAAAACATAT TGATTTCTAC
GCACCTGAAA AAGGTCATAC TATGAATATC AATATACCAC TTGAATTTAT TGGAAAACCA
AAAGGCGTAG AAAAGGGTGG TATTGTTGAA ATTATTCACC ATGAACTCCC CGTTGAAACA
CTTCCTTCTG TTATTGTAGA GAAGCTAGAG ATAGATATTA GTAATCTAGA TCTTGGTGAA
TCATTCCACG TATCTGATTT AAAACTCCCA ACAGGAATGA CTGCAGAGCT TCCAGAAAAC
GAACCATTGG TAACTATAGC AATTCCAAGA GGTATTGAAG TAGAAGAAAC AACAAGTGAA
GAGGAAGTTG AACCAGAAGT AATAGAAAAA GGTAAAAAGG AGGAAGAATA A
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| Protein sequence | MAQHKLEALT RNVVGKKRAV RRLRKQGLIP GVVYGPDIEP LSISIKKSNL IKLLYEVTEA
SIISLSVKDE TGNEVFSHDV FIKNIQYDKL TDEVKHIDFY APEKGHTMNI NIPLEFIGKP
KGVEKGGIVE IIHHELPVET LPSVIVEKLE IDISNLDLGE SFHVSDLKLP TGMTAELPEN
EPLVTIAIPR GIEVEETTSE EEVEPEVIEK GKKEEE
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