Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmel_0154 |
Symbol | |
ID | 5297433 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermosipho melanesiensis BI429 |
Kingdom | Bacteria |
Replicon accession | NC_009616 |
Strand | - |
Start bp | 164939 |
End bp | 166171 |
Gene Length | 1233 bp |
Protein Length | 410 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 640768411 |
Product | recombination factor protein RarA |
Protein accession | YP_001305416 |
Protein GI | 150020062 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2256] ATPase related to the helicase subunit of the Holliday junction resolvase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAGTGGTT TAAGCGAAAT TTTAAGACCT AAGGGTTTTG AAGAGTTTAT TGGTCAGGAA CATTTGTTTG GTGAAAAAGG ATTGATAAGG CTAGCTATTG AGAGTGGAAA TTTATTTTCT GCAGTATTTT ATGGACCACC TGGTTGTGGG AAAACTTCTA CTTTGGAGAT AATAAGGAAA AAGACAGATT TTGAAATTTA TCATTTTAAC GCTGCTGTGA CTTCTACAAT TGATGTGAAA AAGGTATTAG ATTATGCGCA AAAAGTAAAG GGATTAAAAA AGATGCTGAT TTTTGTTGAT GAAATTCATA GGTTTAATAA AAAACAACAG GATATATTTC TCCCCGGAAT AGAACGGGGA GATTATATAT TTATTGGTGC AACCACTGAA AATCCCTTTA AGATGATAAA TCCCGCGTTG TTGTCAAGGA TAAAGGTTAT TGCTTTTAAA AAGTTAAAGG TTTTTGAAAT AAAAAAGCTT TTAGAGAGGG CAATTTCAGT AAAAAACATA GATGTAATGG AAAGTGTTAT GGATTTTATT ACAAGGATTT CAGATGGTGA TGCAAGATTT GCAATAAATA TTTACGATGT GTTGAGTGAT ATGGCAAAAG CACTTGGTAA AGAAATAGTT GACGATGAAA TCGTTACATT ATACGGTGGC GAAGTGAAAA TGGTTTATAC TAGCAAAGAA CATTATGAAC TTGCATCTGC TTTTATAAAA AGCATTAGGG GAAGTGATCC CGACGCGGCG TTGTACTATA TGGCAAGAAT GTTAGAAGTG GGAGAAGATC CAAGATTTAT TGCAAGAAGG TTGGCGATTT TGGCTAGTGA GGATGTAGGA CTTGCGGATC CCATGGCAAT TTTAATAGCA ATTGCAACAG CACAAGCAGT GGAACTGGTT GGACTTCCAG AGTGTGTTTT AAACCTTTCT GAATGTGTTA TATACTTGTC ATTAGCACCA AAGAGCAATT CATCTACTTT AGCTATTTCA AAAGCAATCG AATCTGCAAG AGAGACGATG AATTTGTCTG TACCTTTCAA TTTACTAAAT GTAAAAGATA GTGGATACAA AAATCCACAT CATTATGGTG GTTTTTTGAA AAAAAGTTAC CTTCCAAAAG GAATTTCAGA TAAAGTGTTT TACATTCCAA AAGAGATTGG TAAAGAAAAA AGATTAAAGG AAATTTTGGA AAAATTGTGG GAAGGGGTGA AGGAGTATGG AAATAAAGAT TAA
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Protein sequence | MSGLSEILRP KGFEEFIGQE HLFGEKGLIR LAIESGNLFS AVFYGPPGCG KTSTLEIIRK KTDFEIYHFN AAVTSTIDVK KVLDYAQKVK GLKKMLIFVD EIHRFNKKQQ DIFLPGIERG DYIFIGATTE NPFKMINPAL LSRIKVIAFK KLKVFEIKKL LERAISVKNI DVMESVMDFI TRISDGDARF AINIYDVLSD MAKALGKEIV DDEIVTLYGG EVKMVYTSKE HYELASAFIK SIRGSDPDAA LYYMARMLEV GEDPRFIARR LAILASEDVG LADPMAILIA IATAQAVELV GLPECVLNLS ECVIYLSLAP KSNSSTLAIS KAIESARETM NLSVPFNLLN VKDSGYKNPH HYGGFLKKSY LPKGISDKVF YIPKEIGKEK RLKEILEKLW EGVKEYGNKD
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