Gene Tmel_0154 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_0154 
Symbol 
ID5297433 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp164939 
End bp166171 
Gene Length1233 bp 
Protein Length410 aa 
Translation table11 
GC content34% 
IMG OID640768411 
Productrecombination factor protein RarA 
Protein accessionYP_001305416 
Protein GI150020062 
COG category[L] Replication, recombination and repair 
COG ID[COG2256] ATPase related to the helicase subunit of the Holliday junction resolvase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGTGGTT TAAGCGAAAT TTTAAGACCT AAGGGTTTTG AAGAGTTTAT TGGTCAGGAA 
CATTTGTTTG GTGAAAAAGG ATTGATAAGG CTAGCTATTG AGAGTGGAAA TTTATTTTCT
GCAGTATTTT ATGGACCACC TGGTTGTGGG AAAACTTCTA CTTTGGAGAT AATAAGGAAA
AAGACAGATT TTGAAATTTA TCATTTTAAC GCTGCTGTGA CTTCTACAAT TGATGTGAAA
AAGGTATTAG ATTATGCGCA AAAAGTAAAG GGATTAAAAA AGATGCTGAT TTTTGTTGAT
GAAATTCATA GGTTTAATAA AAAACAACAG GATATATTTC TCCCCGGAAT AGAACGGGGA
GATTATATAT TTATTGGTGC AACCACTGAA AATCCCTTTA AGATGATAAA TCCCGCGTTG
TTGTCAAGGA TAAAGGTTAT TGCTTTTAAA AAGTTAAAGG TTTTTGAAAT AAAAAAGCTT
TTAGAGAGGG CAATTTCAGT AAAAAACATA GATGTAATGG AAAGTGTTAT GGATTTTATT
ACAAGGATTT CAGATGGTGA TGCAAGATTT GCAATAAATA TTTACGATGT GTTGAGTGAT
ATGGCAAAAG CACTTGGTAA AGAAATAGTT GACGATGAAA TCGTTACATT ATACGGTGGC
GAAGTGAAAA TGGTTTATAC TAGCAAAGAA CATTATGAAC TTGCATCTGC TTTTATAAAA
AGCATTAGGG GAAGTGATCC CGACGCGGCG TTGTACTATA TGGCAAGAAT GTTAGAAGTG
GGAGAAGATC CAAGATTTAT TGCAAGAAGG TTGGCGATTT TGGCTAGTGA GGATGTAGGA
CTTGCGGATC CCATGGCAAT TTTAATAGCA ATTGCAACAG CACAAGCAGT GGAACTGGTT
GGACTTCCAG AGTGTGTTTT AAACCTTTCT GAATGTGTTA TATACTTGTC ATTAGCACCA
AAGAGCAATT CATCTACTTT AGCTATTTCA AAAGCAATCG AATCTGCAAG AGAGACGATG
AATTTGTCTG TACCTTTCAA TTTACTAAAT GTAAAAGATA GTGGATACAA AAATCCACAT
CATTATGGTG GTTTTTTGAA AAAAAGTTAC CTTCCAAAAG GAATTTCAGA TAAAGTGTTT
TACATTCCAA AAGAGATTGG TAAAGAAAAA AGATTAAAGG AAATTTTGGA AAAATTGTGG
GAAGGGGTGA AGGAGTATGG AAATAAAGAT TAA
 
Protein sequence
MSGLSEILRP KGFEEFIGQE HLFGEKGLIR LAIESGNLFS AVFYGPPGCG KTSTLEIIRK 
KTDFEIYHFN AAVTSTIDVK KVLDYAQKVK GLKKMLIFVD EIHRFNKKQQ DIFLPGIERG
DYIFIGATTE NPFKMINPAL LSRIKVIAFK KLKVFEIKKL LERAISVKNI DVMESVMDFI
TRISDGDARF AINIYDVLSD MAKALGKEIV DDEIVTLYGG EVKMVYTSKE HYELASAFIK
SIRGSDPDAA LYYMARMLEV GEDPRFIARR LAILASEDVG LADPMAILIA IATAQAVELV
GLPECVLNLS ECVIYLSLAP KSNSSTLAIS KAIESARETM NLSVPFNLLN VKDSGYKNPH
HYGGFLKKSY LPKGISDKVF YIPKEIGKEK RLKEILEKLW EGVKEYGNKD