Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmel_0147 |
Symbol | |
ID | 5297088 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermosipho melanesiensis BI429 |
Kingdom | Bacteria |
Replicon accession | NC_009616 |
Strand | - |
Start bp | 157930 |
End bp | 159318 |
Gene Length | 1389 bp |
Protein Length | 462 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 640768404 |
Product | MATE efflux family protein |
Protein accession | YP_001305409 |
Protein GI | 150020055 |
COG category | [V] Defense mechanisms |
COG ID | [COG0534] Na+-driven multidrug efflux pump |
TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000317216 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAGCATA GGGTAGATTT GTACAAACAG GGGATATTTA AATCACTCTT TTTGTTGGGG TGGCCGTTAA TCGTTTCAAA TTTAATGCAA ACCTTTTACA ATGCGGTTGA TGCGTATTTT CTTGGAAAAC TTGGGAAAGT TGAGTTTTCA GCGCCTACAA TAGTATGGCC ACTTATTTTT GTTTTTATTT CACTTTCCAT AGGTTTTGCA CAGGCTGGTG TTACACTTGT TGCACAGTAT ACAGGCGCTT CTTTAAAGGA AAAAGCAAAA AAATCTGCAG GACAAACGAT AACAATTTCA ACAATTCTTG GTGTTGTTTT ATCGATTGTA GCAATCTTGA TTTCTAGACC TGTTATTACG CTAATAGCAG GTAATGAAAG TAGAGAAGTA GTAAAATTTG CGGTTAGTTA TTTTAACATA GTTATGATAG GACTTCCCTT TGGATTTATT TTTAACTCCG CGGCCTCTAT TTTAAGGGGT TGGGGAGATT CAAAGTTTAC CATGAACCTA ATGTTTATTT CTACTGTGGT TAATATTATT CTAGATCCAA TATTAATCTT TGGAGTTGGA TTTATACCAA AGATGGGTGT GGTAGGTGCT GCTTGGGCAA CGACAATTGC AAGGATTGTA GCAGCGATAA TTTCAATTGA ACACTTGTTT AAAGGAAAAA GAGGGTTTAA AATAGATTTG AATGATTTAA AACCTGATTT TGAACTAATA AAAAGAGTGT TTAGGATAGG TATGCCAAGT TCTCTTAGTA TGAGTGTTAC ATCGTTGGGA TTTGTTGTGA TTATGAAATT TGTTTCAAGT TTTGGTCCTA CAGTGGTGAG TGCCTATGGG GTTGGAAATA GAATAATTAA TTTCATTACA ATGATTTCCT TTGGAATTGG AAATTCAGTT ACAACAATGG TAGGTCAATT TCTGGGAGCA AATGATATAA AACGTGCAGA ACAGACGGTT AAAGTAGCGT TTTTTGCAAA TTTTACCATT GTATTTACGT TGAGTGCTCT TACCTTCTTT TTTGGAGGGC GACTTACACA ATTTTTTATT AACGACCCAG AGGTTATTAA AGTTGGATAT ATCTTTTTTA AGTATGTTTC ATTTTCTTTG CCATTTTTTA CTTCAATGTC GGTGTTTATA AACACACTTG TTGGTGCGGG AAGAACTGAA CTGGCAATGA TAATAGATAT AACTAGATTG TGGGGAATTA GGGTACCTTT AATTGCAATT TTTTCAGCGA GATTTGGATT TACAGGATTG TTTTTTGCGA TGATAATTAG TAATGTAGGT GCTATGATTC TGGCGTATTT GTTTGTGAAA TTTTCCAAAT GGCAAAAAGC GATTATAAAA AGTGAAGAAA GGGGGGCTTT AGATGATATT TACCAATAA
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Protein sequence | MKHRVDLYKQ GIFKSLFLLG WPLIVSNLMQ TFYNAVDAYF LGKLGKVEFS APTIVWPLIF VFISLSIGFA QAGVTLVAQY TGASLKEKAK KSAGQTITIS TILGVVLSIV AILISRPVIT LIAGNESREV VKFAVSYFNI VMIGLPFGFI FNSAASILRG WGDSKFTMNL MFISTVVNII LDPILIFGVG FIPKMGVVGA AWATTIARIV AAIISIEHLF KGKRGFKIDL NDLKPDFELI KRVFRIGMPS SLSMSVTSLG FVVIMKFVSS FGPTVVSAYG VGNRIINFIT MISFGIGNSV TTMVGQFLGA NDIKRAEQTV KVAFFANFTI VFTLSALTFF FGGRLTQFFI NDPEVIKVGY IFFKYVSFSL PFFTSMSVFI NTLVGAGRTE LAMIIDITRL WGIRVPLIAI FSARFGFTGL FFAMIISNVG AMILAYLFVK FSKWQKAIIK SEERGALDDI YQ
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