| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0141 |
|---|
| Symbol | |
|---|
| ID | 5296730 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermosipho melanesiensis BI429 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009616 |
|---|
| Strand | - |
|---|
| Start bp | 150467 |
|---|
| End bp | 151801 |
|---|
| Gene Length | 1335 bp |
|---|
| Protein Length | 444 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 640768398 |
|---|
| Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
|---|
| Protein accession | YP_001305403 |
|---|
| Protein GI | 150020049 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0446] Uncharacterized NAD(FAD)-dependent dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.691559 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGTTG TAATAATTGG GTGTACACAT GCAGGTACTG CTGCGGCTAT AAATGCTTCG
AAATTATACA AGGATGCTGA AATTACCATT TATGAGAGAA ATGATACCAT ATCATTCCTA
TCTTGTGGAA TTGCTTTACA CGTTGGTGGG GTGGTAAAAG ATCCAAGTAA ACTGTTTTAT
TCTTCACCCG AACACCTTAA AAGTTTGGGG ATAAATACAA AAATGAGACA TAATGTAAAA
AAAGTTGATT TTGATGAGAA AACATTGTTG GTAGAGGATT TAAAGAGTGG AGAAATTTTT
GAAGATAGTT TTGATAAATT GATAATTACA ACAGGCTCAT GGCCAATTAT TCCTAATATA
GAGGGAATAG AATTGAATAA CATACTCCTT TCTAAGAATT ATTATCATGC ACAGGAAATT
ATTAAAAGGT CTGAAAATGC AAAAAATGTG GTTGTTATAG GAGCAGGGTT TATAGGTGTT
GAACTTGCTG AAGCAATGAA AGAAAAAGGA AAAAATGTTA CTTTGATAGA TATTGAAAGT
AGAATTTTAA GTAAATATTT AGATGAAGAA TTTACAAAGA TAGCAGAAGA TAAATTATTA
AAAAATGGTA TTAATTTGGC TTTGAATGAA AAAGTTACGA GATTTATTGG GGGAAAAAGT
GTTGAAAAGG TGATAACCGA TAAAGGGGAA TATAACGCGG ATTTGGTTAT TCTCTCTGTT
GGATTTAAGC CAAATACTGA TTTATTTAAA AGAAAATTAG ATATGCTTGA AAATGGTGCA
ATTATTGTTG ACGAATATAT GCAAACAAGC AGAGATGATG TATTTGCAGC AGGAGATTGC
AGTGCTGTAT TTTACAATCC TTTAAAGAAA TATAAGTATA TTCCACTTGC AACAAATGCA
ATTAGAATGG GTACAATAGC GGCATATAAC CTTAACGAAA GAAGATTAAG ACACCTTGGT
ACACAGGGTA CTTCTGGAAT AAAGATTTAC GATTTAAATA TAGCGGCGAC TGGATTAACT
GAATCAATGG CAAAATGTAA TGAGTTAGAA GTAGATTCAG TAGTTATAAC AGAAAACCAC
AGACCGGAAT TTATGCCAAA GTTTGAAAAA GTAATGTTTA AAGTAGTATT TGGAAAAGAT
TCTAAAAAAA TTTTAGGAGC ACAAATACTT TCTAAAGCAG ATTTAACACA ATCTATCAAT
ACAATGTCCG TTGTAATTCA AAATGAAATG ACTATAGAAG AATTAGCATT TGTAGATTTC
TTCTTCCAAC CACACTTTAA CAAACCATGG AACTTTTTGA ATATGGTAGG TTTGGAATAT
TTAAATAGAA TATGA
|
|---|
| Protein sequence | MKVVIIGCTH AGTAAAINAS KLYKDAEITI YERNDTISFL SCGIALHVGG VVKDPSKLFY
SSPEHLKSLG INTKMRHNVK KVDFDEKTLL VEDLKSGEIF EDSFDKLIIT TGSWPIIPNI
EGIELNNILL SKNYYHAQEI IKRSENAKNV VVIGAGFIGV ELAEAMKEKG KNVTLIDIES
RILSKYLDEE FTKIAEDKLL KNGINLALNE KVTRFIGGKS VEKVITDKGE YNADLVILSV
GFKPNTDLFK RKLDMLENGA IIVDEYMQTS RDDVFAAGDC SAVFYNPLKK YKYIPLATNA
IRMGTIAAYN LNERRLRHLG TQGTSGIKIY DLNIAATGLT ESMAKCNELE VDSVVITENH
RPEFMPKFEK VMFKVVFGKD SKKILGAQIL SKADLTQSIN TMSVVIQNEM TIEELAFVDF
FFQPHFNKPW NFLNMVGLEY LNRI
|
|---|
| |