Gene Tmel_0135 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_0135 
Symbol 
ID5297968 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp143050 
End bp143499 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content27% 
IMG OID640768392 
ProductMarR family transcriptional regulator 
Protein accessionYP_001305397 
Protein GI150020043 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAATTCAA ATGATTTTTC TCTTGCATTT TTACTTTTTT CTGAGATTGA AAAGTTAAAG 
TTTCAAATTT TAAGGAGTGA AATGGAGAAA TACAAACTAC ATCCAGGTCA GATTCCCATG
TTTTTTATAA TAAACAAATT TCCTGGCATT ACGCAAAAAG AGATAGCAGA ACATATGATG
GTGAATACCT CAACAGTTGC TATTATGTTA AAAAGATTAG AAAAAGCGGG ATTTGTTAAA
AAAGAAATAG ATGAAAATGA TAGAAGATAT TTTCATGTAT ATCTTACAGA TAAAGCAAAA
GGTATACACG ATAAGTTAAT AAAAAAGGTA AAAGAATTTG AAAAAATGTG TTTTTCTGGA
CTTTCAGATT TAGAGATGAA AGAATTAGAA AATTTATTAA AAAAGATTGT AAATAACTTG
GAGGCGATGA AAGATGAGAA AACTTTTTAA
 
Protein sequence
MNSNDFSLAF LLFSEIEKLK FQILRSEMEK YKLHPGQIPM FFIINKFPGI TQKEIAEHMM 
VNTSTVAIML KRLEKAGFVK KEIDENDRRY FHVYLTDKAK GIHDKLIKKV KEFEKMCFSG
LSDLEMKELE NLLKKIVNNL EAMKDEKTF