| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0133 |
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| Symbol | |
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| ID | 5297337 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | - |
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| Start bp | 139504 |
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| End bp | 141345 |
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| Gene Length | 1842 bp |
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| Protein Length | 613 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 640768390 |
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| Product | ABC transporter, transmembrane region |
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| Protein accession | YP_001305395 |
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| Protein GI | 150020041 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.260657 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGAAA AAAGACCAGT ACATAGGGGA GGGCCTGGAG GACCAATTAG GGGAGCAGTA
GAAAGACCAA AAAATTTTAG AAAAGCGTTG AAAAGACTTC TGGGTTATTT AAAGCCATAT
ACGGTTCCAT TAATAATAGT TTTTGCAATG GCAATTACGG GTACAGTTTT TAGTATAATT
GCTCCAAAGG TATTGGGAAA GGCAACTACG AAATTGTTTC AAGGGTTCTT GGCAAAAAGG
CTCTTTTCAA ATGCAAGAAT TGATTTAGAT GGAATTTTGC AAATTTTGAT AAAAGTGGGG
ATTTTGTATG GGATTTTTGC TCTTTTTATG TATATACAGC AATATATAAT GGCAGGTATT
TCTCAAAAAG TAGTGAAGAA ACTTAGAACT GAAATTATGG AAAAACTTTC GAAATTACCT
TTAAAGTTTT ACGATTCAAG AACACATGGA GAAATTTTAA GTCGTGTAAC AAACGATGTT
GACTTAATTA GTAATACATT GAACCAAAGT TTAACACAGC TTATAACTTC ACTTGTGACT
ATTGTTGGAG TTATTATTAT GATGCTTACA ATTAGTCCGT TGTTAACACT TGTAACTTTG
GTAACTCTAC CAATTAGTAT TTCATTAATA GTATTTATAG TGAAAAAGTC ACAAAAATAC
TTTAAGAATC AGCAAAATTC TCTTGGAAGT GTTAACGGGC ATGTTGAGGA AATGTTTAGC
GGATTAATAG TTGTAAAGGG GTACAATAGA GAAGAAGATA GTATAGAAAA GTTTGAAAAA
TATAATGAGG AATTATTTGG AGCATCTTGG AAGGCTCAAT TTATTTCTGG AATTACTATG
CCAATAATGA GATTTGTGGG TAATTTAGGA TATGTAATTG TGTCCATTAT GGGCGGAATT
ATGGTTACAA AACGTGCAAT TCAGCTTGGT GATGTTCAAG CGTTTATTCA ATATTCTCAA
CAGTTTAATC AACCAATTTC TCAAGTTGCA AATATCATGA ATATGATTCA ATCAACGCTT
GCAGCTGCTG AAAGAGTTTT TGAAATTCTA GATGAAGAAG AGGAAAAGCC TGATCCTCAG
GATGCTGTTG AGTTGGAAAA AGTTGAGGGG AATATAAAAT TTGAAAATGT GTATTTTAGT
TATAGAGAAG ATAAAAAGTT GATAGAAGAT TTGAATATTG AGGTAAGAAG TGGACAAACA
ATTGCAATAG TTGGACCAAC TGGTGCGGGA AAAACTACGT TAGTTAATCT TTTGATGAGA
TTTTATGAAA TTCAAGGTGG TAGTATAACA ATAGATGGTG TTGATATTAG AAAATTGAAG
AGGAATAATT TAAGGAAGTT TTTCGGAATG GTTTTGCAGG ATACTTGGCT GTTTAATGGT
ACTATAAGGG AGAATATAGC ATATGGAAAA GAAAATGCCA CAGAAGAAGA AATAATAAGA
GCTGCCAAAC TAGCACACGC CCATCACTTT ATTATGGCAC TCCCTGGTGG TTATGATGCA
ATGATAAATG AAGAGGCATC TAATATATCT CAGGGTGAAA AACAACTTAT AACTATTGCT
AGAGCTTTTG TAGCAGATCC TGATATATTG ATATTAGATG AAGCAACAAG TAATGTGGAT
ACGTTAACTG AAAAATACAT ACAAAGTGCA ATGAAAAGGT TGATGCACAG TAGGACGAAT
TTTGTGATTG CTCATAGGCT TTCTACAATT AGAGATGCTG ATATGATCTT GGTAATGAAT
GAGGGACAAA TAATAGAGAA AGGCACACAC AAACAATTAA TGGAAAAAAA TGGTTTTTAT
GCAGAACTTT ATAAAAGTCA ATTTTTAGGT GCTTACGTAT AA
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| Protein sequence | MSEKRPVHRG GPGGPIRGAV ERPKNFRKAL KRLLGYLKPY TVPLIIVFAM AITGTVFSII
APKVLGKATT KLFQGFLAKR LFSNARIDLD GILQILIKVG ILYGIFALFM YIQQYIMAGI
SQKVVKKLRT EIMEKLSKLP LKFYDSRTHG EILSRVTNDV DLISNTLNQS LTQLITSLVT
IVGVIIMMLT ISPLLTLVTL VTLPISISLI VFIVKKSQKY FKNQQNSLGS VNGHVEEMFS
GLIVVKGYNR EEDSIEKFEK YNEELFGASW KAQFISGITM PIMRFVGNLG YVIVSIMGGI
MVTKRAIQLG DVQAFIQYSQ QFNQPISQVA NIMNMIQSTL AAAERVFEIL DEEEEKPDPQ
DAVELEKVEG NIKFENVYFS YREDKKLIED LNIEVRSGQT IAIVGPTGAG KTTLVNLLMR
FYEIQGGSIT IDGVDIRKLK RNNLRKFFGM VLQDTWLFNG TIRENIAYGK ENATEEEIIR
AAKLAHAHHF IMALPGGYDA MINEEASNIS QGEKQLITIA RAFVADPDIL ILDEATSNVD
TLTEKYIQSA MKRLMHSRTN FVIAHRLSTI RDADMILVMN EGQIIEKGTH KQLMEKNGFY
AELYKSQFLG AYV
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