| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0123 |
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| Symbol | ushA |
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| ID | 5296552 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | - |
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| Start bp | 126544 |
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| End bp | 128091 |
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| Gene Length | 1548 bp |
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| Protein Length | 515 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 640768380 |
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| Product | bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor |
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| Protein accession | YP_001305385 |
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| Protein GI | 150020031 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0737] 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAATT TTAAGTTGTT TGTAGTGTTA TTTGTAATTT TTGCTATTAG TCTTTTTGCA
ACAAAAGTTA TTATTTTCCA CATTAACGAT ACTCATGGCC ATGCTTGGAC ATTTAGTGAA
TATCACAATC CAAATATAGG TGGCTTTGCA GTAATTGCAT CAATTATTGA TGAAGAAAGG
GCGAAGAATC CCAATGTTTT GTTTTTACAT GCAGGGGACA TAAACACAGG TGTTCCTGAA
TCTGATCTTT TAAATGCATT ACCAGATATT TTTGCTCTTA ATAGAATGAA ATTAGATGCA
ATGGCAGTAG GAAACCATGA ATTTGATAAA ACAAGAGATG TGTTGATGTA TCAGATGGAT
ATTGCAAAAT TCCCATTTTT ATCAGCGAAT ATTTACAAAG ATGGTAAGCC ATTCTTTAAA
CCTTACATTA TAAAAAACGT TGGTGGGGTA AAAATTGCTA TATTTGGTTT AACTACAGAA
GAAACTGCTA TTTTAGAACC ATTGTACAGT AGAGACTTGG AGTTTAGAAA TGCCATAGAA
GTAGCAAAGG AAATAGTTCC GGGGTTAAGG AAAAAAGCTG ATATTGTGGT TGCACTTACA
CATTTAGGAA TGGGACAAGC CTACGAAGGA AATTATACAA CTTCAGAAGA GTTGGCAAAA
ATGGTTGATG GAATAGATAT TATAATAGAT GGGCATAGTC ATACAAAACT TGAAAAGGCG
AAGGTTATTA ATAACACAAT AGTGGTTCAA GCTTGGGAAT GGGGAAAAAT TGTTGGGAAA
TTAGAACTTG ATGTTGAAAA TGGAAAAATA GAAAATTGGA ATTGGACACC AATTCCAGTT
AATTTGAAAG TATATAAGGG CAAAGATGAA GATGGTAATT CAATTTATGA GTTTGTAGGA
AAAGAATATA AACCAACTGA GTATGTAAAA GTTCCACTTG ATTATTTTGC AAAAATTGGT
TCAGAAAAAC TTGATACGAT AATAGGGGAA ACAAAGATCT TGTTGGATGG AGAAAGGGCA
CATGTAAGAT CTGGCGATAC AAACTTAGGG CATATAATAA CCGATGCAAT GCTATGGAAA
ACAGGAGCAG ATATTGCATT TCAGAATGGT GGAGGAATAA GAGCATCTGT TGAACCTGGA
AAGATAACCA TAAGGAATAT TTTAACTGTG TTGCCATTTG GAAATACAGT GTATGTTATG
AAAATGACAG GAGAGCAAGT AATGAAAGTG TTGGAATATG CAGCAACAAT TCCAGAAGGA
AAAGGTGCTT GGTTACATGT TGGTGGATTA GTGTGGAAGA GTGAAGGTGG AAAAGTGACA
GAAGTAATGG TGAATGGTAA GCCACTTGAG ATGGATAAAG TTTACACAAT TGTAACAAAT
AACTACATGG CAGGCGGAGG AGATGGATAT TCAGTGCTTT CAGAAAATAA AGCATCAGGT
TACGATACAG GCTTTGTTTT GGCAGATGTT GTAGTAGAAT ACATTCAAAA AGCTTTAAAA
GGTATGATTG AGAATTACGA TGATACACCA AGATACATAA GAAAATAG
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| Protein sequence | MKNFKLFVVL FVIFAISLFA TKVIIFHIND THGHAWTFSE YHNPNIGGFA VIASIIDEER
AKNPNVLFLH AGDINTGVPE SDLLNALPDI FALNRMKLDA MAVGNHEFDK TRDVLMYQMD
IAKFPFLSAN IYKDGKPFFK PYIIKNVGGV KIAIFGLTTE ETAILEPLYS RDLEFRNAIE
VAKEIVPGLR KKADIVVALT HLGMGQAYEG NYTTSEELAK MVDGIDIIID GHSHTKLEKA
KVINNTIVVQ AWEWGKIVGK LELDVENGKI ENWNWTPIPV NLKVYKGKDE DGNSIYEFVG
KEYKPTEYVK VPLDYFAKIG SEKLDTIIGE TKILLDGERA HVRSGDTNLG HIITDAMLWK
TGADIAFQNG GGIRASVEPG KITIRNILTV LPFGNTVYVM KMTGEQVMKV LEYAATIPEG
KGAWLHVGGL VWKSEGGKVT EVMVNGKPLE MDKVYTIVTN NYMAGGGDGY SVLSENKASG
YDTGFVLADV VVEYIQKALK GMIENYDDTP RYIRK
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