Gene Tmel_0123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_0123 
SymbolushA 
ID5296552 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp126544 
End bp128091 
Gene Length1548 bp 
Protein Length515 aa 
Translation table11 
GC content34% 
IMG OID640768380 
Productbifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor 
Protein accessionYP_001305385 
Protein GI150020031 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0737] 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAATT TTAAGTTGTT TGTAGTGTTA TTTGTAATTT TTGCTATTAG TCTTTTTGCA 
ACAAAAGTTA TTATTTTCCA CATTAACGAT ACTCATGGCC ATGCTTGGAC ATTTAGTGAA
TATCACAATC CAAATATAGG TGGCTTTGCA GTAATTGCAT CAATTATTGA TGAAGAAAGG
GCGAAGAATC CCAATGTTTT GTTTTTACAT GCAGGGGACA TAAACACAGG TGTTCCTGAA
TCTGATCTTT TAAATGCATT ACCAGATATT TTTGCTCTTA ATAGAATGAA ATTAGATGCA
ATGGCAGTAG GAAACCATGA ATTTGATAAA ACAAGAGATG TGTTGATGTA TCAGATGGAT
ATTGCAAAAT TCCCATTTTT ATCAGCGAAT ATTTACAAAG ATGGTAAGCC ATTCTTTAAA
CCTTACATTA TAAAAAACGT TGGTGGGGTA AAAATTGCTA TATTTGGTTT AACTACAGAA
GAAACTGCTA TTTTAGAACC ATTGTACAGT AGAGACTTGG AGTTTAGAAA TGCCATAGAA
GTAGCAAAGG AAATAGTTCC GGGGTTAAGG AAAAAAGCTG ATATTGTGGT TGCACTTACA
CATTTAGGAA TGGGACAAGC CTACGAAGGA AATTATACAA CTTCAGAAGA GTTGGCAAAA
ATGGTTGATG GAATAGATAT TATAATAGAT GGGCATAGTC ATACAAAACT TGAAAAGGCG
AAGGTTATTA ATAACACAAT AGTGGTTCAA GCTTGGGAAT GGGGAAAAAT TGTTGGGAAA
TTAGAACTTG ATGTTGAAAA TGGAAAAATA GAAAATTGGA ATTGGACACC AATTCCAGTT
AATTTGAAAG TATATAAGGG CAAAGATGAA GATGGTAATT CAATTTATGA GTTTGTAGGA
AAAGAATATA AACCAACTGA GTATGTAAAA GTTCCACTTG ATTATTTTGC AAAAATTGGT
TCAGAAAAAC TTGATACGAT AATAGGGGAA ACAAAGATCT TGTTGGATGG AGAAAGGGCA
CATGTAAGAT CTGGCGATAC AAACTTAGGG CATATAATAA CCGATGCAAT GCTATGGAAA
ACAGGAGCAG ATATTGCATT TCAGAATGGT GGAGGAATAA GAGCATCTGT TGAACCTGGA
AAGATAACCA TAAGGAATAT TTTAACTGTG TTGCCATTTG GAAATACAGT GTATGTTATG
AAAATGACAG GAGAGCAAGT AATGAAAGTG TTGGAATATG CAGCAACAAT TCCAGAAGGA
AAAGGTGCTT GGTTACATGT TGGTGGATTA GTGTGGAAGA GTGAAGGTGG AAAAGTGACA
GAAGTAATGG TGAATGGTAA GCCACTTGAG ATGGATAAAG TTTACACAAT TGTAACAAAT
AACTACATGG CAGGCGGAGG AGATGGATAT TCAGTGCTTT CAGAAAATAA AGCATCAGGT
TACGATACAG GCTTTGTTTT GGCAGATGTT GTAGTAGAAT ACATTCAAAA AGCTTTAAAA
GGTATGATTG AGAATTACGA TGATACACCA AGATACATAA GAAAATAG
 
Protein sequence
MKNFKLFVVL FVIFAISLFA TKVIIFHIND THGHAWTFSE YHNPNIGGFA VIASIIDEER 
AKNPNVLFLH AGDINTGVPE SDLLNALPDI FALNRMKLDA MAVGNHEFDK TRDVLMYQMD
IAKFPFLSAN IYKDGKPFFK PYIIKNVGGV KIAIFGLTTE ETAILEPLYS RDLEFRNAIE
VAKEIVPGLR KKADIVVALT HLGMGQAYEG NYTTSEELAK MVDGIDIIID GHSHTKLEKA
KVINNTIVVQ AWEWGKIVGK LELDVENGKI ENWNWTPIPV NLKVYKGKDE DGNSIYEFVG
KEYKPTEYVK VPLDYFAKIG SEKLDTIIGE TKILLDGERA HVRSGDTNLG HIITDAMLWK
TGADIAFQNG GGIRASVEPG KITIRNILTV LPFGNTVYVM KMTGEQVMKV LEYAATIPEG
KGAWLHVGGL VWKSEGGKVT EVMVNGKPLE MDKVYTIVTN NYMAGGGDGY SVLSENKASG
YDTGFVLADV VVEYIQKALK GMIENYDDTP RYIRK