| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0115 |
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| Symbol | |
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| ID | 5296944 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | - |
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| Start bp | 117287 |
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| End bp | 118945 |
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| Gene Length | 1659 bp |
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| Protein Length | 552 aa |
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| Translation table | 11 |
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| GC content | 28% |
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| IMG OID | 640768366 |
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| Product | signal transduction histidine kinase, LytS |
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| Protein accession | YP_001305377 |
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| Protein GI | 150020023 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3275] Putative regulator of cell autolysis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.368367 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAACAA ATATTAGTTT GATTTTACTT GAAAGGGTAT CATTAATATT GGTAATAACG
TATATAATTT TCCAGACATA TTTTATAAAA AACATTTTTG GAAGGTCATT AGTTACCAAG
AATAAAATGG TAATTGGGTT TATTGGAGGA TTTCTTGGAA TACTTGGGAC ACTTTTTGGT
ATAAGATACA ACGGTGCTAT TGTGAATTAT AGAGATATTG GGGTTATTTT ATCGGGTATG
TTGGCAGGTG TGTCTGGAGG GATTGTTGCA GCGTTTATTT CAGCAAGTTT TAGATTATTC
TTAGGAGGTA TTACAGCTGT TCCCTGTTTT TTGGGTACTT TAACAGCTGG AATTATAAGT
GGAGTGTTAT CAGAGTATTA TGGTAGAAAA CATTTTACGT TTTTTAGAAC TATGTATTAT
ACGATACTAA TAGAAATAAT TCATTTAATG TATGTGCTTT TAATGGTAAA GCCTTTTTAT
TTGGCTTATG ATATAACTTT TAAAATATTA TTTCCTATGG TTATTACCAA TACTTTAGGT
GTTTCCTTTT TAAACTTTAT GATGTGGAAT TTAGAAGAAA AACTTCAAAA TGTAGAAGAA
AATACTATAA GTTCGATATT TGTAATTATG GAAAGAATTT TAAATACTAT AGAAATAGGT
TTTAACGAAA ATAGTGCAAT TTTGATAGCT CAGGTTATAC TTGAAAACAC AGATTTTGAT
GCAGTAGCTT TAACGGATAA AGAATATATT TTAGCTCATG TTGGTATTGG AGATGATCAT
CATATTAGTG GTGAAAAGAT AAAAACTCAA GCAACAAAAA AGGTAATAAA TAGTGGGTAT
GGATTAAAAG TAGTTGGTAA AAAAGGAATA AATTGTGAGA AAGAAAATTG TCCTCTTTTT
TCTGCTATTG TAATACCACT GAATAATATA AATGGTGACT TAATTGGAAC TTTAAAATTG
TATTATTCAA AAAGCCATAG TATGCAAAAT AAGGATATTA TTTTTGGAAA GAAACTTGCT
CAAGTTTTGT CTTTAATAAT ATCTATTTCA GAAATAAACG AATCTTTAAA ACTTGCTACT
GAAGAAAAAA TGAGAGAATT GATGTCCAAC ATGAGTCCAC ATTTTTTGTT TAATACGCTT
AATGCGATAA AATACATTTC AAGAAGAGAG CCTCAAAGAG TTGATAAGTT TATAGATAAT
TTATCAAGTT TGCTAAGATA TACACTTTAT GAAAATTCCA AATTGGTATC GGTAAGAAAC
GAAGTAGATT TTACAAAAAA CTATCTTGAG TTGATGAAAT TACGTTTTGA AGATAAGTTA
AATTATGAAG TGAAAGTAGC TAAAGAATTG GAAGAGTATT TGATTCCCCC TTTTATATTA
CAACCGCTGG TTGAAAATTC TATAAAACAT GGAATGAAGG GAGGAAAGTT ATTAATAAGA
ATTTCAATAT CAAAATCTGA TAAAAAGATT AAAATCTGTG TGGAAGACAA TGGGAAAGGA
TTTAGTGAAA TGAAAAAAAC TGGTAAAGGG CTTTTATTAA TTAAGAAAAG ATTGAAGGTG
TTATTTGGTG ATAATTATGT ATTTAATATA AAAAACAATT TTTTTGGTGG AGTGGTTGTT
GAAATAAAGT TTGATTCTAA AGTTGGTGAA TTAATATGA
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| Protein sequence | MLTNISLILL ERVSLILVIT YIIFQTYFIK NIFGRSLVTK NKMVIGFIGG FLGILGTLFG
IRYNGAIVNY RDIGVILSGM LAGVSGGIVA AFISASFRLF LGGITAVPCF LGTLTAGIIS
GVLSEYYGRK HFTFFRTMYY TILIEIIHLM YVLLMVKPFY LAYDITFKIL FPMVITNTLG
VSFLNFMMWN LEEKLQNVEE NTISSIFVIM ERILNTIEIG FNENSAILIA QVILENTDFD
AVALTDKEYI LAHVGIGDDH HISGEKIKTQ ATKKVINSGY GLKVVGKKGI NCEKENCPLF
SAIVIPLNNI NGDLIGTLKL YYSKSHSMQN KDIIFGKKLA QVLSLIISIS EINESLKLAT
EEKMRELMSN MSPHFLFNTL NAIKYISRRE PQRVDKFIDN LSSLLRYTLY ENSKLVSVRN
EVDFTKNYLE LMKLRFEDKL NYEVKVAKEL EEYLIPPFIL QPLVENSIKH GMKGGKLLIR
ISISKSDKKI KICVEDNGKG FSEMKKTGKG LLLIKKRLKV LFGDNYVFNI KNNFFGGVVV
EIKFDSKVGE LI
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