| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0110 |
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| Symbol | |
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| ID | 5297626 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | - |
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| Start bp | 111172 |
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| End bp | 112407 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 640768361 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_001305372 |
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| Protein GI | 150020018 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTATG AATTAAAATA TTCAAAATTG GGTAATAATC TGAAATCCTC CTTAATAAGA
GAATTACTAA AATATGCATC TGTTCCTAAC GCTATTTCCT TTGGTGGTGG TGTTCCAGAT
CCTGAAACCT TCCCGAGACA CGAGCTTTCC AAAATCGCAG CAGAAGTAAT AGAAAATGAG
TATAGTTATG TTCTACAATA CAGCACAACA GAAGGTGACT TGGAACTTGC GAAACAGATG
TTGAATCTTT TAGATAAGAT TTATGGAATT AACGGACTTG ATGAAACTAA CATAATGTTT
ACTACAGGTT CGCAACAAGC ATTAGAACTT GCGGGAAAGG TTTTCTTGGA TGAGGAAAGT
ATTGCAATAG TTGAAAATCC ATTTTATTTG GGTGCAGCAA GTGCTTTTAG AATGAGGTTT
TCAAAATTTG TTTCAGTATC TTTGGAAGAT GATGGAATGA ATGTGGAAGT TCTTGAGAAA
AAGTTGAAAG AGTTAGATGA AAAAGGAGAA ATAAAAAAAG TAAAGTTTAT TTATGTAATT
CCAAATTTCC ACAATCCTGC CGGTGCTACA TTGTCACTTG AGAAGAGAAA AAGAATAATA
GAACTTGCAG AAAAATATGA TCTTTTAATA ATTGAAGATG ATCCATATGG TTTGCTAAGG
TTTGAAGGTG AGCACTTACC ATCATTATTT AAATTGGCTG GTAAAGAAAG GGTAATATTA
TTAAATACAT TTAGTAAAAT TCTTGCTCCA GGATTAAGGA TTGGAGCTGT TATTGCTGAT
AAAGAAATAG TTAGAAAGTT TGTACTTGCA AAACAGGGAA CGGATTTGTG TAGTCCCGCA
CTTACACAAA GAATTGCTGC GAGATACCTT GAAAGATACG ATTTAATTGA ACAGATTACT
CCAACGATTA AGTTGTATAA ATCTAAGAGA GATACAATGA TAAAGGCCTT TGAAGAATAC
TTTTCTGATA TAAAGGGAAT TAAGTGGATA TATCCTTCAG GAGGATTGTT TACCTGGGTA
ACTCTACCAG AAGGTTTTGA TACTTTGGAA ATGTTTGAGA TTGCAAAGAA AAAATTGGTA
TTTTACATAC CAGGACAAGC ATTTACACCA GATGATAGCA AATCTCCATC GATGAGAATG
TCATTTTGTT TGCCTCCACA TGAAAAGATA ATAGAAGGGG TAAAAAGATT GAAAGAGGTT
ATTCTTGAAT ATGGTAGGAA CGAGGGGTTG ATATAG
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| Protein sequence | MNYELKYSKL GNNLKSSLIR ELLKYASVPN AISFGGGVPD PETFPRHELS KIAAEVIENE
YSYVLQYSTT EGDLELAKQM LNLLDKIYGI NGLDETNIMF TTGSQQALEL AGKVFLDEES
IAIVENPFYL GAASAFRMRF SKFVSVSLED DGMNVEVLEK KLKELDEKGE IKKVKFIYVI
PNFHNPAGAT LSLEKRKRII ELAEKYDLLI IEDDPYGLLR FEGEHLPSLF KLAGKERVIL
LNTFSKILAP GLRIGAVIAD KEIVRKFVLA KQGTDLCSPA LTQRIAARYL ERYDLIEQIT
PTIKLYKSKR DTMIKAFEEY FSDIKGIKWI YPSGGLFTWV TLPEGFDTLE MFEIAKKKLV
FYIPGQAFTP DDSKSPSMRM SFCLPPHEKI IEGVKRLKEV ILEYGRNEGL I
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