| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0089 |
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| Symbol | |
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| ID | 5297028 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | - |
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| Start bp | 94018 |
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| End bp | 95031 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 640768340 |
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| Product | heat-inducible transcription repressor HrcA |
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| Protein accession | YP_001305351 |
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| Protein GI | 150019997 |
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| COG category | [K] Transcription |
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| COG ID | [COG1420] Transcriptional regulator of heat shock gene |
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| TIGRFAM ID | [TIGR00331] heat shock gene repressor HrcA |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000627651 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAACT TAACGGGAAG ACAAAAAAAA ATTCTCTATT GTTTGGTGAG GGAATACGTG
AAATCAGGAA TACCTGTAAG TTCGAGTAAA ATATTGGAAA GTACAAATTT AGATTGGAGT
GGTGCAACGG TAAGGAATGA TATGAGAAAA TTGGGGTATT TAGGATATGT ATTTCAGCCC
CATACTTCAG CTGGAAGAAT ACCGACTGAC AAAGGTTTGA GGTTTTACGT AAATGAAATT
TTGAAAATGA GAAGTGAGAC GAAAAAAGTT GGTTCATCGA TAGATGTAAA GACAGATTTT
CCAATAGGTG ATCTTGATAA GATTATTCAA GGAGCTGCAA AGCTGCTTTC TAATACTTTA
AAGGCTTTTG TTATTGTGGA AAAACCAAAT CCCATGTATT TGAGAATAAG GAGAATAGTT
CTAACTCCCG TTACAAAAAC GTTTTCAATA GTTAATATTA TTACAGAGCT TGGTCTTACT
TCTGTACTTC CTATACAACA TTCTGAAGTT TCAAATTTTG AAGATGTCGA ACAATTTTTA
AATAAAAGCC TGGATGGTAT TTTGTTGAGT GAATTTAAGT TGAAATTAAA AGAAGTGGTA
GAAAAGTTTT CATGGGTTGG AGGAAGGTTG AAAGAATTTA TAGAGCTTTC AGAAAAAATA
GCATCGGAGA AGTATGAAGA ATATGTTGTA GAAGGAGTTT TCAACCTTGT AAATGCAAAA
AGGTTCAATG AAGAAAAGTT GAGAGAGATA GTGAAAATAT CTACAAATTC AGATTTTTAT
CCGAGAATTT TTTCACTGGG TGAGGGAATT TATATTGGAA AAGAGCATAA TATAAGAAAT
TTTGAGCAGT ATTCTGTTTT GATTATGCCA TATTTTGTTT TTGAAAGAGA AGTAGGAAGA
ATAGCAGTAA TATTTGATAA ATTTAGTGAT TATTCTAGAG TGTTTGATAG TGTGGAATAT
GTTGTAAACA GATTGACAGA GTATTTTACC ATTGTAGCAA GAAATGTTGA ATAA
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| Protein sequence | MKNLTGRQKK ILYCLVREYV KSGIPVSSSK ILESTNLDWS GATVRNDMRK LGYLGYVFQP
HTSAGRIPTD KGLRFYVNEI LKMRSETKKV GSSIDVKTDF PIGDLDKIIQ GAAKLLSNTL
KAFVIVEKPN PMYLRIRRIV LTPVTKTFSI VNIITELGLT SVLPIQHSEV SNFEDVEQFL
NKSLDGILLS EFKLKLKEVV EKFSWVGGRL KEFIELSEKI ASEKYEEYVV EGVFNLVNAK
RFNEEKLREI VKISTNSDFY PRIFSLGEGI YIGKEHNIRN FEQYSVLIMP YFVFEREVGR
IAVIFDKFSD YSRVFDSVEY VVNRLTEYFT IVARNVE
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