Gene Tmel_0080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_0080 
Symbol 
ID5297971 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp85279 
End bp85689 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content36% 
IMG OID640768331 
Producthypothetical protein 
Protein accessionYP_001305342 
Protein GI150019988 
COG category[S] Function unknown 
COG ID[COG0432] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00149] secondary thiamine-phosphate synthase enzyme 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAGTT ATACAGAATA CTTATGGTTT AACACTAAGA AAAGAAAAGA ACTTGTAAGG 
ATAACGGATA CAATTGAAAA TATTGTGAAA AAGAGTGGAA TAAAAGAGGG GTTTTGTCTT
GTGTCAGCTA TGCATATTAC TGCAGGGATA ATTGTCAATG ATGATGAATC TGGTCTACAC
AAGGATATAT GGGAATGGTT AGAAAAACTT GCACCAGTTG CAGAATACAA TCACCATTGG
ACTGGAGAAG ATAATGGGGA TGCACACTTA AAAAGAATTT TAACGCATCA TCAGGTGGTG
TTACCTGTAA CAAACGGCCG TTTGGATCTA GGACCTTGGG AGCAAATATT TTATGCAGAG
TATGACGGTC AGAGAAGAAA AAGAGTAGTC GTTAAAGTAA TTGGTGAATA A
 
Protein sequence
MKSYTEYLWF NTKKRKELVR ITDTIENIVK KSGIKEGFCL VSAMHITAGI IVNDDESGLH 
KDIWEWLEKL APVAEYNHHW TGEDNGDAHL KRILTHHQVV LPVTNGRLDL GPWEQIFYAE
YDGQRRKRVV VKVIGE