Gene Tmel_0078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_0078 
Symbol 
ID5296926 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp82964 
End bp83593 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content32% 
IMG OID640768329 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_001305340 
Protein GI150019986 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCTTG ATCTTTTAAT TGAAGGTGGA TTGATAAGTA TTCCAAATAG GGCAAAGGCG 
ACCTTTTGTT CAGTTGCTTT GCTTGAGGAA AAAGATAGGA AAATATTGAT TGAACCGGGA
GATTATGTTA CACATTCCAT TTTAGAGGAA AAATTGAAAG AGAGAAATCT TACAACAGAC
GATATTACAG ACATTGTATT GACACATTTT CATCTTGATC ATGCTTACAA TTCTATTTTC
TTTAAAAATG CAACGGTACA TTTGCACGAA AATTTTTTAA AGAAAAACTA CGAAAAATTT
GGAATGATTG TGGGAAAACA GTATAAGATG ATTTTAGATT CGTGGAATAG TTTCCAAACG
TTTAAAGACG GGGATATTTT ATTTGATAAA ATAAATGTAT ACCACACACC ATGGCATGCA
AAAGAACATT GTTCATTTGT TGTTGAAACG GAAAATTTTG GAAGAGTGTT TTTTCCAGGT
GATATTGTTA TGACTAGAGT GGAGTTTTAT GATATAATGA GAATGTTGAG AGATGATGAA
TGTGCGAGAT TTGTTAGGAA ATTTGTTTCT AAAACCGATT ATTTAGTTTT TACTCACGAT
AGTGGTATTT CTTTGGATAA ATGGAGGTGA
 
Protein sequence
MKLDLLIEGG LISIPNRAKA TFCSVALLEE KDRKILIEPG DYVTHSILEE KLKERNLTTD 
DITDIVLTHF HLDHAYNSIF FKNATVHLHE NFLKKNYEKF GMIVGKQYKM ILDSWNSFQT
FKDGDILFDK INVYHTPWHA KEHCSFVVET ENFGRVFFPG DIVMTRVEFY DIMRMLRDDE
CARFVRKFVS KTDYLVFTHD SGISLDKWR