Gene Tmel_0072 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_0072 
Symbol 
ID5296791 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp77080 
End bp77943 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content31% 
IMG OID640768323 
Producthypothetical protein 
Protein accessionYP_001305334 
Protein GI150019980 
COG category[S] Function unknown 
COG ID[COG1284] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTAAAA ACATGCCTTT AAAAGAGATA ATACAAGAAT ATATCCTTTC AACAATAGGG 
GTAATTTTAA CTGCTTTAGG ACTTGTAATA TTTCTAATAC CAAATAATAT TGCTGCAGGT
GGTGCATCTG GACTTGCCAT AGTTTTACAC TCAGTTATAC CAATTCCCGT AGGAATATGG
ATGTATATTT TAAACGCCAT TTTGTTTTTT ATAGCATTTT TAATTATTGG CTTCGACTTT
AGTTACAAAA CAATTTATTG TACATTTTTA CTAAACTTTT TTATTGATTT TTTCGATAGG
GTAGTTAAAA TTCCAACTTA CAATGGAAAT GATTTAATAC TTGCTGTATT CTTCGGTGAT
ATTTTAACTG CAATTGGTAT GGCAATTACT TTTTCCCAAA ACTCATCCAC AGGTGGAACT
GATATTTTGG CAAAAATATT TAATAAATTT TTTGCAACAC CAATGGGCAC AACACTACTT
GTAATAGACT TTTTCATCGG ATTTTTAGCA GGAGTTGCTT TTGATCCAAA GATAGGAATG
TACTCAATTC TTGCTATAAT AATCAATGGT ATCACAATTG ATTTTGTACT AAAAGGTTTA
GAACTCGCAA TTACAGTAAC TATTATCACG GAGAACAACA AACCCATTGA AGAATTTATA
ATTAAAAATA TGGGAAGAGG TCTTACTTAC CTAAAGGGAA AGGGAGGATA CACAAAAAAA
GACAGGGATA TCATCTTTGT TTCAATTAGA AGGCGTGAAC TTAGTGAGCT TATTCATTTC
ATCAAAAAAG TGGATCCAAA CGCCTTTGTA ATAGTAAATG AATCAAGATA TGTGCTTGGT
GAAGGGTTTA AAAGAAACTT GTGA
 
Protein sequence
MAKNMPLKEI IQEYILSTIG VILTALGLVI FLIPNNIAAG GASGLAIVLH SVIPIPVGIW 
MYILNAILFF IAFLIIGFDF SYKTIYCTFL LNFFIDFFDR VVKIPTYNGN DLILAVFFGD
ILTAIGMAIT FSQNSSTGGT DILAKIFNKF FATPMGTTLL VIDFFIGFLA GVAFDPKIGM
YSILAIIING ITIDFVLKGL ELAITVTIIT ENNKPIEEFI IKNMGRGLTY LKGKGGYTKK
DRDIIFVSIR RRELSELIHF IKKVDPNAFV IVNESRYVLG EGFKRNL