Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmel_0057 |
Symbol | |
ID | 5297045 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermosipho melanesiensis BI429 |
Kingdom | Bacteria |
Replicon accession | NC_009616 |
Strand | + |
Start bp | 61433 |
End bp | 62740 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 640768310 |
Product | peptidase U62, modulator of DNA gyrase |
Protein accession | YP_001305321 |
Protein GI | 150019967 |
COG category | [R] General function prediction only |
COG ID | [COG0312] Predicted Zn-dependent proteases and their inactivated homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACATAA ACGAATTTAA AGAAAAATTA TTCTCAATAG CCAAAGCAAA CGGTTTTGAA GCACAAGTTG AAATAACTGA AAAATCAGAA TTTATGTTAT CCTACGCTAA CAACGATATT GATCAATATA AAGATGCATC AAATTCCACA ATAACTTTAA AAATACTAAA AGATGGAAAA ATCGGTAAAA GTATTTCGGA AAAATTTGAC AATCCAGAAG AATTATTCAC TGAAGCTTTT TCTAATTGGA AAATTACAGA TAGTGAAGAT GAAAACTTTT TTTACGATGG AAAAGATACC TATATAGAAA TGGATACATA CGATGGCAGT TTTGAAAATA CAAGTGTAAA AGAAAAAATA AAGTTCATTA AAAAATTACA CGACAGCGCA AAATGTGATG AAAGAATAGT AATGGTACCA AATGCAGTAT TTCAAAACAT AAAGATCTCT AAAACCCTTT CAAATACTTT AGGCTTAGAT ATCTCATCAA AAATGGATGG TGGTTACTCA TATACAATAG CCATTTCAAA AGATGAAAGC ACACATTCTG GCTTCTGGTT TGAAGTTGGG AAAAAATTTG AAGACTTAGA TCCTGAAGAA ATCGGAAAGA AAGCATGCAA GGAGGCTTTA AGCTTACTTG GTGCAAAGTC TGTAAAATCT GGAAAATACA GGGTAATATT AAGAAACACG GCATTTGAAG ATATGTTAGG ACTATTGAAA AGCATGATTT CCGCGGAAAA TGTGCAAAAA AACATGTCAC CATTAAAAGG TAAAATCAAC GAAAAAATTG GAAGTAATAT ATTAACAATA AAAGATTTAC CATATGTGAA GGGAAGCATA AACAATAGAC CTTTTGACGA TGAGGGTGTA CCTACAAAAG AAACAACTAT TTTCGAAAAC GGTATATTTA AAAACTATCT TTACGACCTG AAAACTGCCA AAAAAGATAA TGTCAAATCA ACGGGAAATA GTATAAATGG TTCGATTTCA CCAATAAATC TAGTTATTGA AAAAGGTGAT TATTCTTATG AGGAGCTTAT TAAAAAACTA AAAAGCGGTA TAATAATAGT TGGTGTTGAT GGAATGCATT CTGGATCAAA TCCAGTATCC GGTGACTTTT CACTAGGTGC CAGGGGGTAT AAAGTCGAAA ATGGAAATAT CGTAGGTGCA GTTGAACAAA TAACTATCTC GGGAAATTTT GTAGAACTAT TAAGTAAAAT AGAAGCAATT GGAAATGATT GGAAACACTT TGGAGATACA CTGACACCAA GTGTATTAAT AAGTGAATTA GATATTGCAG GAGAATAA
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Protein sequence | MNINEFKEKL FSIAKANGFE AQVEITEKSE FMLSYANNDI DQYKDASNST ITLKILKDGK IGKSISEKFD NPEELFTEAF SNWKITDSED ENFFYDGKDT YIEMDTYDGS FENTSVKEKI KFIKKLHDSA KCDERIVMVP NAVFQNIKIS KTLSNTLGLD ISSKMDGGYS YTIAISKDES THSGFWFEVG KKFEDLDPEE IGKKACKEAL SLLGAKSVKS GKYRVILRNT AFEDMLGLLK SMISAENVQK NMSPLKGKIN EKIGSNILTI KDLPYVKGSI NNRPFDDEGV PTKETTIFEN GIFKNYLYDL KTAKKDNVKS TGNSINGSIS PINLVIEKGD YSYEELIKKL KSGIIIVGVD GMHSGSNPVS GDFSLGARGY KVENGNIVGA VEQITISGNF VELLSKIEAI GNDWKHFGDT LTPSVLISEL DIAGE
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