| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0048 |
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| Symbol | |
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| ID | 5296507 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | - |
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| Start bp | 51081 |
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| End bp | 52322 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 640768300 |
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| Product | SufS subfamily cysteine desulfurase |
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| Protein accession | YP_001305312 |
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| Protein GI | 150019958 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0520] Selenocysteine lyase |
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| TIGRFAM ID | [TIGR01979] cysteine desulfurases, SufS subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCTCGA AGAATATACG GGATGATTTC CCCGTTTTAG AAAGGAAGAT AAATGGAAAT
AACATTGTAT ATTTTGATAG TGCTGCAAGT ACATTAAAAC CAAAAATGGT TATAGAAAAG
CTTTCAAATT TTTATCTTAA TAATTACGCA AATGTTCATA GGGCAGTTCA TACACTAGCA
TCTGAATCTA CTCAGATACT AGAAGCTTCT AGGAAAAAAA TTGCAAAATT TTTAAATGCA
CAAGAGGAAG AAGTAATTTT TACTTCTGGA AGTACCATGT CTTTAAACCT TGTTGTAGAA
AGTTTTGTAA GAAGTGGAAT ACTTAACAAA GATGATAATG TTTTAGTAAC TATGGTAGAA
CATCATGCAA ATTTCGTTCC ATGGATTAGA TTGTCAAAGT TGCATGGTTA TAATGTTTTA
GCGGTTTATC CTAGTGGAAG GTTTGGCGAA TTAAAATTAG AAGATTTTAA TGTAAAAGTT
AATCCAAAAA TCGTGGCTAT AACAGCTCAA TCAAATGTTA CAGGTCAGTT GATTGATATA
AAAAAGATAA GAGAAAAATT TCCAAATGCA ATTTTTGTTG TAGATGGTGC ACAATTTTTA
CCTCATGCAC AGATTGATGT AAAAGATTTG GATATAGATT TTTTGGTATT TTCTGCTCAT
AAAATGCTTG GTCCTAGTGG TATAGGTGTT TTGTGGGGTA AAAGAGAACT TCTAGAAAAA
ATGGAGCCAT TTTTGTATGG TGGAGAAATG ATAGATAAGG TTAGTTTAGA TGAAATTACA
TTTAATGTTT TGCCTTTTAG ATTTGAAGCG GGTACCCCAA ATATTGCAGG AATTGCAGGT
TTTTCATTTG CATTGGAATA TTTGGAAAGG ATAGAAATGA AAAAGGTAGA AAATCATATT
AGAAGGCTAA CGGAGTATGC TTTGGAAAAA GTTAGTAAAA TTGACGGTGT AGAATTATAT
GGTCCACTTA ATGAGAGCCA ATTGGGTATA TTAAGTTTTA ATGTAAATGG TGTACATCCC
CATGATATTG CGCATTTGTT AGATGAAAAG TTTGGAATAG CCGTTAGAAG TGGCCATCAT
TGTGCACAAC CTTTAATGAG TATTTTAAAA TCCCAGAGTA AGTTAGACGT ATTTCCAAAT
AGTACATGTA GGGCAAGTTT TTATGTATAT AACACTTTAG ATGAAATTGA TAAACTAATT
TATGCTATTA AAAAGGTAAA GGAGTGGTTT GATGTACTCT GA
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| Protein sequence | MLSKNIRDDF PVLERKINGN NIVYFDSAAS TLKPKMVIEK LSNFYLNNYA NVHRAVHTLA
SESTQILEAS RKKIAKFLNA QEEEVIFTSG STMSLNLVVE SFVRSGILNK DDNVLVTMVE
HHANFVPWIR LSKLHGYNVL AVYPSGRFGE LKLEDFNVKV NPKIVAITAQ SNVTGQLIDI
KKIREKFPNA IFVVDGAQFL PHAQIDVKDL DIDFLVFSAH KMLGPSGIGV LWGKRELLEK
MEPFLYGGEM IDKVSLDEIT FNVLPFRFEA GTPNIAGIAG FSFALEYLER IEMKKVENHI
RRLTEYALEK VSKIDGVELY GPLNESQLGI LSFNVNGVHP HDIAHLLDEK FGIAVRSGHH
CAQPLMSILK SQSKLDVFPN STCRASFYVY NTLDEIDKLI YAIKKVKEWF DVL
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