Gene Tmel_0043 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_0043 
Symbol 
ID5297102 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand- 
Start bp46125 
End bp47246 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content30% 
IMG OID640768295 
Productbifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein 
Protein accessionYP_001305307 
Protein GI150019953 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase
[COG0807] GTP cyclohydrolase II 
TIGRFAM ID[TIGR00505] GTP cyclohydrolase II
[TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACCAT TTATTTTGAT TGATTCTGAA AGAGAAAAAG AAGGAGATTT GTTTGTTCCA 
GCCCAAATTT GTAATGAGGA GGTTGTTAAC TTCTTTTTAG AGAAAGGGAA GGGATTACTT 
TGTCTTGCTA CTTATGAAAA AGGATTATTG GAAAGAGGTT TTTTTAAGTT ACCAAGTAAT 
GGTTCAAAGA CCAACTTTTT TATACCAGTA GATTATGGAA CTGGAACTGG AATTTCGGTA 
TTTGAAAGAA CTCAAACGAT AAAAAAAATA AGTGAAGGAT TAGATGTCTC ATGTTTTACC 
TATCCAGGAC ATGTCTTTTT GCTTGGTGCA AAAGATGGAA GATGGGGACA TACAGAAGCT 
GCAACATATT TTTCTGAAAA ATTAGGTTTT TCACCACATG GTGTAATTAT TGAAATTCTG 
AATAATGAAG GGAGTTCGCA CGATTTTGAG TATATATTAG AATTTTCGAA AAAGTATTCT 
TTGGAAGTTG TTGATATTAG GGATTTGTAT AAAGAATATA GCAAGGATAT TTTTGGTGTG 
GAAACAAAAG CAAAACTTCC AACAAAATTT GATGAAAATT TTGAAATTTA CACATTTAAG 
AATGTTTATG ATGGCAAAGA ACATGTTGCA GTGGTGAAAA AACCATTAGG TTCTGTACCA 
TTTGTTAGAA TTCATTCTGA ATGTGCAACA GGTGATATTT TTCATTCTTT AAGATGTGAT 
TGTGGAGAGC AGCTTGAAAA GTCGATAAAA ATAATTTCAA AACAAGGAGG TATATTAATT 
TATTTAAGAC AAGAAGGAAG AGGAATTGGA TTAAACAATA AAATTAAAGC ATATGATTTA 
CAAGAGAAAG GTTATGACAC AGTAGAGGCA AATTTAATGC TTGGTTTTAA AGAGGACGAA 
AGAGATTACT ATGTAGCATA TCTTATCTTG AAAACTTTTG GAGTAAAGAA AATAAGGCTT 
CTCACAAACA ATCCAAAAAA GTCGGAGGAG TTAAAAAAAT ATGGTTTAGA AGTTATAGAT 
ATTCCATTGA ATGGTAACTT GAATAAATAC AATAAAAAGT ATCTAAAAAC TAAAGTATTA 
AAGATGGGGC ATAAAATTTC ATTGAAAGGG GAGAAAATAT GA
 
Protein sequence
MKPFILIDSE REKEGDLFVP AQICNEEVVN FFLEKGKGLL CLATYEKGLL ERGFFKLPSN 
GSKTNFFIPV DYGTGTGISV FERTQTIKKI SEGLDVSCFT YPGHVFLLGA KDGRWGHTEA 
ATYFSEKLGF SPHGVIIEIL NNEGSSHDFE YILEFSKKYS LEVVDIRDLY KEYSKDIFGV 
ETKAKLPTKF DENFEIYTFK NVYDGKEHVA VVKKPLGSVP FVRIHSECAT GDIFHSLRCD 
CGEQLEKSIK IISKQGGILI YLRQEGRGIG LNNKIKAYDL QEKGYDTVEA NLMLGFKEDE 
RDYYVAYLIL KTFGVKKIRL LTNNPKKSEE LKKYGLEVID IPLNGNLNKY NKKYLKTKVL 
KMGHKISLKG EKI