Gene Tmel_0042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_0042 
Symbol 
ID5298110 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand- 
Start bp45676 
End bp46128 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content31% 
IMG OID640768294 
Productriboflavin synthase 
Protein accessionYP_001305306 
Protein GI150019952 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0054] Riboflavin synthase beta-chain 
TIGRFAM ID[TIGR00114] 6,7-dimethyl-8-ribityllumazine synthase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAGAAG GAAAATTTTA CGGCTGTGAA GATTTAAAGA TTGGTATAGT TCTTTCTAGA 
TTTAATTCAC AAGTAACAGA AAGATTATTA AAAGGTGCTT TGGATTGTTT GAAACGTCAT 
GGAATTAGTA ATATAGATAT AGTAAAGGTT CCAGGAAGTA TGGAAATAGG TTTTGTATTG 
AAAAGATTAA TAAACAAAGA TTATGATGCA TTAATTGCAT TAGGTGCAAT AATAAGGGGG 
GAAACGTATC ATTTTGATGT TGTTGCAAAT GAGATATCAA AAGCTGTGAT GCAACTTAAT 
TTGGAAGGGA AAGTTCCGAT TTCTTTTGGC ATTTTAACAA CTGATACTTT AGAACAAGCA 
ATAAATAGAT CAGGAGCAAA GAGTGGAAAT AAAGGCTTTG AAGCAGCAAT GGTAGCTATT 
GAAATGGCTC AATTAAAAAG ACAATTGATT TAA
 
Protein sequence
MIEGKFYGCE DLKIGIVLSR FNSQVTERLL KGALDCLKRH GISNIDIVKV PGSMEIGFVL 
KRLINKDYDA LIALGAIIRG ETYHFDVVAN EISKAVMQLN LEGKVPISFG ILTTDTLEQA 
INRSGAKSGN KGFEAAMVAI EMAQLKRQLI