| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0035 |
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| Symbol | |
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| ID | 5297104 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | - |
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| Start bp | 39157 |
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| End bp | 39834 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 640768285 |
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| Product | ABC transporter related |
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| Protein accession | YP_001305299 |
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| Protein GI | 150019945 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000173721 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATTATTA AAGCAAAAAA TCTTACAAAA GTTTATGGAA AAAGGGAGAG AGTTGTAGCA
TTAAAAGACA TAAATCTTGA AATTGAAGAA GGGGAAATTG TAGCGATTTT AGGTCCCTCA
GGGTGCGGTA AAACAACACT TTTAAATTGT CTTTCAGGGT TAGATGAACT AACATCTGGT
AGTGTAGAAG TTCTAGGGAA AAGTTTAACT GGCATGAATG AAGAGGAAAA AACAAAATTT
CGCTCTGTGT ATATGGGATT TATTTTTCAG TTTTTCAATT TAATCCCCGT GTTAAATGCA
ATTGAAAATG TAGAATTACC ACTTTTAATA TCCAAAAAAT TAAAAGTAAG TGAGGTAAGA
AAAAGGGCAT TAGATTGGCT TGAAAAACTT CACATTGCTC ATAGAGCAAA GGCTTATCCA
AGTGAGATGT CCGGAGGAGA ACAACAAAGA GTTGCAATAG CAAGAGCTTT GATAAATAAT
CCTAAAATTG TTTGGGCTGA TGAACCAACA GGAGCTCTTG ATACAAAAAA CAGTGAGGAA
ATAATGGATA TTATTTTGAA TATGAATAGG GAACTAAATA CAACTTTTGT TATTGTAACT
CATGATCCAA ATGTGGCTAA AAAGGCAAAT AGAATAATTA GAATGGATAG TGGAAGGATT
TTATCAGAAG GAGTGTAA
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| Protein sequence | MIIKAKNLTK VYGKRERVVA LKDINLEIEE GEIVAILGPS GCGKTTLLNC LSGLDELTSG
SVEVLGKSLT GMNEEEKTKF RSVYMGFIFQ FFNLIPVLNA IENVELPLLI SKKLKVSEVR
KRALDWLEKL HIAHRAKAYP SEMSGGEQQR VAIARALINN PKIVWADEPT GALDTKNSEE
IMDIILNMNR ELNTTFVIVT HDPNVAKKAN RIIRMDSGRI LSEGV
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