Gene Tmel_0034 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_0034 
Symbol 
ID5297103 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp36832 
End bp39153 
Gene Length2322 bp 
Protein Length773 aa 
Translation table11 
GC content31% 
IMG OID640768284 
ProductATP-dependent DNA helicase RecG 
Protein accessionYP_001305298 
Protein GI150019944 
COG category[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG1200] RecG-like helicase 
TIGRFAM ID[TIGR00643] ATP-dependent DNA helicase RecG 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0189216 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTACATAC CACTTTTAAT AGAAGATTTT TTAGAGAAGG TAGAAAGAAT AAAAGATTCC 
TTTGAATTAA TAGAATTTTT TGAGGAGAAT TTTGAAAAAA TAGATGATCC TTTAAAGAAT
ATTCCTGAAG TTTCTAAAAG ACTTCAGGAG TTTTATGATT ATATAGTGAA AATGAAGCAT
TTGAATAGAG AAAGAATAGA AAAACGTATG AAGTTTATTC CAGGAATGGT TAAAAGGTTT
AGAGATATGT ATTTAGTTTA CAAAGCAGAA AAGCAGGGAA ATTTAAAAGA GCTTGATTTA
TCCGTTAAGT ATTTAAAAGG AGTAGGGCCA AAAAGAGCAG AAAAATTGAT GAAATTGGGG
GTTAAAACGG TTGAAGATTT ATTAAATTAT TTTCCAAGAG ATTATGAAGA TAGAAGAAAA
GTTATGCCTC TACCTATACT CAAAGAAGAT GAAAAAGTAG TTACTAGTGG CGTCTTGTCC
GCGGTTGAAA AGATAAAAAA AAGTGGACTT TCGATTGTGA GTGCAGTGCT TTCAGATGGA
ATGTATCAAA TTCTTTTAAA GTGGTTTAAT CAAGATTACA TAGGAAATGT TTTAAAGACT
TTGATGAGAA AGAAAGTGTA TGTATTTGGA TTGGTGAAAA AAGGATTCTA TGGTACTTTG
GAAATCCATA ATCCGGAAAT AGAAGTTATT GGAAATTCTT CACGAGAGAT TATGCCGGTT
TATTCTTTAA CAGAAGGTAT AAAGCAAAAT GTAATTAGAA GAATAATCAA AGAAAACTTG
TATAATATTT ACAATTTTAA AGATTACCTT CCAGATGAGC TAAAAGGAAA AAGAAGGCTT
TTAGATGTTT ACCAAGCATA TACGGGAATG CATTTTCCTT TAAGTATGTA CCATCAAAAA
ATGTCACGTT TTAGACTAGC ATATGAAGAA ATATTATATT TACAACTTGC GTTTTTTCTT
TCAAAAAAGG AAAATGAAAA TATAGGTGGT ATCTCAAAGA ATTTTGAAGG GAAGTTATCA
TCTGAGTTAT TAAAACAGTT ACCTTTTAAG CTTACTAATG CTCAGTTAAA TGCATATGAA
GAGATCAAAA AAGATCTAAA ATCAGATAAA CCTATGAATA GATTATTACA AGGAGATGTG
GGTTCAGGAA AAACAATAGT TTCTGAACTT GCTATTTTGG ATAATTATGA AGCAGGATTT
CAATCTGCAG TAATGGTTCC AACTTCAATT TTGGCTATTC AAAATTTTAA AAAAATGTTT
GAACATCTTT CGAGATTTGG GATTAGAGTA GCATTGCTTT TAGGGGCGAC TTCAACAACT
GAGAAAAATA GGATAAAACA AATGCTTAAA AATGGTGATT TAGATGTGGT TGTTGGAACT
CATGCTTTAA TACAGGAAGA TGTGCATTTT AAAAATTTGG GATTGGTTGT AATTGATGAG
CAACATAGAT TTGGCGTAAG ACAAAGAAAA GAGCTTATTG CAAAAGGAAA ATTAGTAGAT
ACGTTAGTGA TGACCGCTAC TCCTATACCA AGAACTCTTT CACTTTCTGT TTATGGAGAT
CTTGATGTTT CAATAATAGA TGAAATGCCT AAAGGAAGAA AACCTATAAA AACTTTTGTT
GTTCATCAAA CCAAAATAGA TGAAGTATAT AAATTTATAA TAAGTGAAGT TGAAAATGGC
GGGCAGGCTT ATATTGTTTA TCCATTGATA GATGATTCTG AAAAACTTTC TGTGAAATCA
GCCGTTTCTA TGCATGAAAA GCTTAGAGAA GAATATTTTA AAGATATTTC AACAGCTTTA
ATTCACGGTA GGATGAGTGA TTTTGAAAAA GATGAGATAA TGTACAAATT TTCGCGAGGA
GAAATCAAAA TATTGATTTC AACAAGTGTA ATAGAGGTGG GGATAGATGT GCCCCAAGCA
ACTGTAATAG TTATTGAAAA CGCGGAAAGA TTTGGTCTAG CTCAATTGCA TCAGTTAAGA
GGAAGAGTTG GGAGAGGAAA TAAGCAGTCA TATTGCTATT TAACTGTTGG AAATGTTTCA
AGGGAAACCC TTGAAAGATT GAATTTCTTT GCTTCAACGA ATGATGGTTT CAAAATTTCA
GAATATGATT TAAAGTTAAG AGGGCCTGGG GAATTTTTAG GTGTAAAACA ACACGGATTG
CCAGAATTTA AAGTAGCTGA TATTATTAAC GATATAGATA TTATCTTAAT GGCTCGGGAA
GATGCCAAGT ATATAGTGAA TAACATAGAG AAATTTAAAA CTTTAATAGA ATATGTAAAA
GATATTTACA AAGAAAGATT AGAATTTTTG GATGTAGGTT GA
 
Protein sequence
MYIPLLIEDF LEKVERIKDS FELIEFFEEN FEKIDDPLKN IPEVSKRLQE FYDYIVKMKH 
LNRERIEKRM KFIPGMVKRF RDMYLVYKAE KQGNLKELDL SVKYLKGVGP KRAEKLMKLG
VKTVEDLLNY FPRDYEDRRK VMPLPILKED EKVVTSGVLS AVEKIKKSGL SIVSAVLSDG
MYQILLKWFN QDYIGNVLKT LMRKKVYVFG LVKKGFYGTL EIHNPEIEVI GNSSREIMPV
YSLTEGIKQN VIRRIIKENL YNIYNFKDYL PDELKGKRRL LDVYQAYTGM HFPLSMYHQK
MSRFRLAYEE ILYLQLAFFL SKKENENIGG ISKNFEGKLS SELLKQLPFK LTNAQLNAYE
EIKKDLKSDK PMNRLLQGDV GSGKTIVSEL AILDNYEAGF QSAVMVPTSI LAIQNFKKMF
EHLSRFGIRV ALLLGATSTT EKNRIKQMLK NGDLDVVVGT HALIQEDVHF KNLGLVVIDE
QHRFGVRQRK ELIAKGKLVD TLVMTATPIP RTLSLSVYGD LDVSIIDEMP KGRKPIKTFV
VHQTKIDEVY KFIISEVENG GQAYIVYPLI DDSEKLSVKS AVSMHEKLRE EYFKDISTAL
IHGRMSDFEK DEIMYKFSRG EIKILISTSV IEVGIDVPQA TVIVIENAER FGLAQLHQLR
GRVGRGNKQS YCYLTVGNVS RETLERLNFF ASTNDGFKIS EYDLKLRGPG EFLGVKQHGL
PEFKVADIIN DIDIILMARE DAKYIVNNIE KFKTLIEYVK DIYKERLEFL DVG