Gene Tmel_0033 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_0033 
Symbol 
ID5297421 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp35931 
End bp36821 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content32% 
IMG OID640768283 
Productradical SAM domain-containing protein 
Protein accessionYP_001305297 
Protein GI150019943 
COG category[R] General function prediction only 
COG ID[COG2516] Biotin synthase-related enzyme 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.531209 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATATTGA GGGCATCATA TGGGACGTTG GCACTTTTGG GATATGTAAG GAAAAGTGTA 
AGGATGGATA CAGCATATTT TATGGTTGAT GGAAAATGTG TTTTTGATTG TTCCTTTTGT
TCCCATGCAA GAAATGCAAA AGTTGATAAT AAATATTTAT CAAGGGTTAT ATGGAAAGAA
GTATCAATTG AAGATTTAAG CAAGTTGAAT GTAAAGAGGA TTTGTCTTCA AGTTGTAAGT
TATAAAGGAT ATAGAGAAGA TTTAAGGTTG CTTTTGGGAA AATTAAAGGG TAAAAGAATT
TCTGTATCAG TTAGGGCTTT AGATTTAGAT GAAATTGATG AGTATTTTTC ATATGGTGTA
GATACTATAG GTTTATCAGT CGATGTTGTA AATGATGAGC TTTTTAAAAA TATTAGGGGA
GGAAGTTTGA AAATAACAAA GAAATTAATT AGTGATGCGG CAAAAAAATA TAAAGGAAAG
ATTACCACAC ATGTGATAGT TGGTATGGGA GAAAGTGATA AAGAACTCGT GGACTTTTTT
TATGAAATGA AAGATTTAAA CGTTAATGTA GCGTTGTTTT CATTTACACC GATAAAAGGT
ACGAAATTTG AACATCGAAA ATCTCCAAGT AGTGAAAGAT ATAGGAAAAT TCAACTTGCA
AGGTATCTAA TTTTTGAAAA ACATGTTTCT AGGGATGTGT TTGTTTTTAA AAACGAAAAT
TTGGAAGAGA TAGATTTTGG ATATATTGAA GGACTAGGCC GCGCCTTTTT AACGTCAGGT
TGTACTTATT GTACAAGACC ATACTACAAT GAAAAACCTG GAAGTATGCC ATATAACTTT
TTTGAATACA GTAGAGAACT TGAGGAGATT GCAAGGGGGA TTTTGAAGTG A
 
Protein sequence
MILRASYGTL ALLGYVRKSV RMDTAYFMVD GKCVFDCSFC SHARNAKVDN KYLSRVIWKE 
VSIEDLSKLN VKRICLQVVS YKGYREDLRL LLGKLKGKRI SVSVRALDLD EIDEYFSYGV
DTIGLSVDVV NDELFKNIRG GSLKITKKLI SDAAKKYKGK ITTHVIVGMG ESDKELVDFF
YEMKDLNVNV ALFSFTPIKG TKFEHRKSPS SERYRKIQLA RYLIFEKHVS RDVFVFKNEN
LEEIDFGYIE GLGRAFLTSG CTYCTRPYYN EKPGSMPYNF FEYSRELEEI ARGILK