Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmel_0032 |
Symbol | |
ID | 5297024 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermosipho melanesiensis BI429 |
Kingdom | Bacteria |
Replicon accession | NC_009616 |
Strand | - |
Start bp | 35380 |
End bp | 35934 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 640768282 |
Product | isochorismatase hydrolase |
Protein accession | YP_001305296 |
Protein GI | 150019942 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1535] Isochorismate hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.983597 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGGTTTT TCAAAGAAAG GGAAAAGCAT CCACTTGTGA TAAAGAACCC TGCTCTTTTA ATAATCGATG TACAGAGTTA CTTTTTTGAT AAAAAAAGTT TGGCATATTT GAGAGGAATT GAAAATATTT TTGGAAATAT TGAGAAATTA ATAAAACAGT TTGAAGAAAA AGGTTATCCA GTAATATCTA CACTACATGT TGGTGGAACA GATAAAATGA AAAAGTGGTG GGGAAATATT GTAAAGGATG TAGAACCTTA TTTTAAGGCA TCATATGTTA TCAAAAAAAA TACATATGAT GCATTTTACA ACACAGAACT TGAAGAAATC CTAGAAAAAA AATCTGTTAA GGATTTAGTA ATTACGGGAG TTATGACACA TCTATGTTGT GAAACCACCG CAAGGAGTGG GTTTGTAAGA GGATATAATA TTGTTATGGT TGAAGATGCA TTATGGGACA AAGATGAATT TTATCATTTT TTATCTTTGA AATCACTAGC TCATGGATTT GCTGTTATTT CTTCAACGGA GGAAGTTTTA TGCGAGTTGG AATAG
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Protein sequence | MRFFKEREKH PLVIKNPALL IIDVQSYFFD KKSLAYLRGI ENIFGNIEKL IKQFEEKGYP VISTLHVGGT DKMKKWWGNI VKDVEPYFKA SYVIKKNTYD AFYNTELEEI LEKKSVKDLV ITGVMTHLCC ETTARSGFVR GYNIVMVEDA LWDKDEFYHF LSLKSLAHGF AVISSTEEVL CELE
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