Gene Tmel_0032 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_0032 
Symbol 
ID5297024 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp35380 
End bp35934 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content31% 
IMG OID640768282 
Productisochorismatase hydrolase 
Protein accessionYP_001305296 
Protein GI150019942 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1535] Isochorismate hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.983597 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGGTTTT TCAAAGAAAG GGAAAAGCAT CCACTTGTGA TAAAGAACCC TGCTCTTTTA 
ATAATCGATG TACAGAGTTA CTTTTTTGAT AAAAAAAGTT TGGCATATTT GAGAGGAATT
GAAAATATTT TTGGAAATAT TGAGAAATTA ATAAAACAGT TTGAAGAAAA AGGTTATCCA
GTAATATCTA CACTACATGT TGGTGGAACA GATAAAATGA AAAAGTGGTG GGGAAATATT
GTAAAGGATG TAGAACCTTA TTTTAAGGCA TCATATGTTA TCAAAAAAAA TACATATGAT
GCATTTTACA ACACAGAACT TGAAGAAATC CTAGAAAAAA AATCTGTTAA GGATTTAGTA
ATTACGGGAG TTATGACACA TCTATGTTGT GAAACCACCG CAAGGAGTGG GTTTGTAAGA
GGATATAATA TTGTTATGGT TGAAGATGCA TTATGGGACA AAGATGAATT TTATCATTTT
TTATCTTTGA AATCACTAGC TCATGGATTT GCTGTTATTT CTTCAACGGA GGAAGTTTTA
TGCGAGTTGG AATAG
 
Protein sequence
MRFFKEREKH PLVIKNPALL IIDVQSYFFD KKSLAYLRGI ENIFGNIEKL IKQFEEKGYP 
VISTLHVGGT DKMKKWWGNI VKDVEPYFKA SYVIKKNTYD AFYNTELEEI LEKKSVKDLV
ITGVMTHLCC ETTARSGFVR GYNIVMVEDA LWDKDEFYHF LSLKSLAHGF AVISSTEEVL
CELE