Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmel_0026 |
Symbol | |
ID | 5297398 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermosipho melanesiensis BI429 |
Kingdom | Bacteria |
Replicon accession | NC_009616 |
Strand | + |
Start bp | 30360 |
End bp | 30836 |
Gene Length | 477 bp |
Protein Length | 158 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 640768277 |
Product | phosphodiesterase |
Protein accession | YP_001305291 |
Protein GI | 150019937 |
COG category | [R] General function prediction only |
COG ID | [COG0622] Predicted phosphoesterase |
TIGRFAM ID | [TIGR00040] phosphoesterase, MJ0936 family |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.239005 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGGTTAA TTCTCAGTGA TTCTCACGAT AATTTAACAA AAGCAAAAGA AATTGAAAAA GTAATAGAAA GTTATAAAAT TGACACAATT TTCCATTGTG GTGATTTTGT TGCACCATTT ATCCTTCCTT ATTTTTTTAA AGACAATATA GAATTTTATG GGGTTTTTGG AAACAATGAT GGAGAAAGAT TACTACTCTC AAAAAAATCC AACGGGAAAA TCAGAACAGG CCCTTATGAA ATTTTAATTC AAAATTTTAA AATTTTCTTA ATGCACGAAC CATATGCGCT TAAAGCCGCA AAAGAAAGCA ATTTATACGA TTTTATCTTT TTTGGACATA CCCATGAATT GGTTGTTGAA AAATATAATA ATTCAGTTAT AATTAATCCA GGCGAATCTT CAGGGTGGCT TACAGGAAAA GCAACCGTTG TTCTACTTGA ACCTGAAGAA AAACGATGGG AAATCCTTAC TATTTAA
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Protein sequence | MWLILSDSHD NLTKAKEIEK VIESYKIDTI FHCGDFVAPF ILPYFFKDNI EFYGVFGNND GERLLLSKKS NGKIRTGPYE ILIQNFKIFL MHEPYALKAA KESNLYDFIF FGHTHELVVE KYNNSVIINP GESSGWLTGK ATVVLLEPEE KRWEILTI
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