Gene Tmel_0026 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_0026 
Symbol 
ID5297398 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp30360 
End bp30836 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content30% 
IMG OID640768277 
Productphosphodiesterase 
Protein accessionYP_001305291 
Protein GI150019937 
COG category[R] General function prediction only 
COG ID[COG0622] Predicted phosphoesterase 
TIGRFAM ID[TIGR00040] phosphoesterase, MJ0936 family 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.239005 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGGTTAA TTCTCAGTGA TTCTCACGAT AATTTAACAA AAGCAAAAGA AATTGAAAAA 
GTAATAGAAA GTTATAAAAT TGACACAATT TTCCATTGTG GTGATTTTGT TGCACCATTT
ATCCTTCCTT ATTTTTTTAA AGACAATATA GAATTTTATG GGGTTTTTGG AAACAATGAT
GGAGAAAGAT TACTACTCTC AAAAAAATCC AACGGGAAAA TCAGAACAGG CCCTTATGAA
ATTTTAATTC AAAATTTTAA AATTTTCTTA ATGCACGAAC CATATGCGCT TAAAGCCGCA
AAAGAAAGCA ATTTATACGA TTTTATCTTT TTTGGACATA CCCATGAATT GGTTGTTGAA
AAATATAATA ATTCAGTTAT AATTAATCCA GGCGAATCTT CAGGGTGGCT TACAGGAAAA
GCAACCGTTG TTCTACTTGA ACCTGAAGAA AAACGATGGG AAATCCTTAC TATTTAA
 
Protein sequence
MWLILSDSHD NLTKAKEIEK VIESYKIDTI FHCGDFVAPF ILPYFFKDNI EFYGVFGNND 
GERLLLSKKS NGKIRTGPYE ILIQNFKIFL MHEPYALKAA KESNLYDFIF FGHTHELVVE
KYNNSVIINP GESSGWLTGK ATVVLLEPEE KRWEILTI