| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0022 |
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| Symbol | |
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| ID | 5297334 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | - |
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| Start bp | 23321 |
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| End bp | 24187 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 640768273 |
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| Product | degV family protein |
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| Protein accession | YP_001305287 |
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| Protein GI | 150019933 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1307] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR00762] EDD domain protein, DegV family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.314645 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACTA AAATTATTTT AGATAGTACA AGTGATATTC CAAAAAATTG GCTTGAAAAA
TACGATATTG ATATTGTTTC GTTACATGTT AATTGGCCTA ATGATGAAAG TGAACCTGAT
GACACAAGAG ACGAAGAAGA GTTAAAAGAA TTTTATGAAA AACTATCAAA TGCAGAGCAA
TTACCAAAAA CTTCACAACC ATCGATTGTT CAATTTCAAG AAGCATATAA AAAAGCTATT
GATAATGGAT ATGATAGTAT TTTGGTTTTA ACCATATCCA CAAAGATGTC TGGAACGTAT
AATTCAGCAT TGCTTGCCTC TCAGGAATTT GAAATTCCAA TAAAGGTGAT AGATACCAAG
ATGGCTTCTT CAGTTATAGC AAACATGGCA AGATATGCAC GTGAATTACT TGAAAGTGGT
ATGGATTTAG ATGATGTGGT AGAACAACTA CAAATCGCAA GGGAGAATAA AAAATTTCAC
GCTATATTTT TTGTTTCCGA TTTTGATTTT TTGGTTAAAG GCGGGAGAGT AAGTAGATTT
TCTGGATTTG TAGGCAATTT ATTAAAAATT AAAGTTGGAA TTTTTATTAA CAAAGATGGT
GAAATGATAC CATTTGATAA AGTAAGAGGT TATAAAAAGG CGTATAATAT GATTTTAACA
AAAATGGAAG AAGAGGGAGT AAAGATTGGT AAAAAGATAG GGTTAATTGG AATACATTGT
AATGCAAAAG AACATGTTGA AGAGATGTTG AAGTTAATAA GAGAAAGATA TAAATTGGAA
TATTTTGAAA TGTCAAATAC TGGTAAAGTT ATTTCTACAC ATGTGGGAAT TGGTATGGCA
GGGTTTGGTA TAGAGATTTT GGAATAA
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| Protein sequence | MKTKIILDST SDIPKNWLEK YDIDIVSLHV NWPNDESEPD DTRDEEELKE FYEKLSNAEQ
LPKTSQPSIV QFQEAYKKAI DNGYDSILVL TISTKMSGTY NSALLASQEF EIPIKVIDTK
MASSVIANMA RYARELLESG MDLDDVVEQL QIARENKKFH AIFFVSDFDF LVKGGRVSRF
SGFVGNLLKI KVGIFINKDG EMIPFDKVRG YKKAYNMILT KMEEEGVKIG KKIGLIGIHC
NAKEHVEEML KLIRERYKLE YFEMSNTGKV ISTHVGIGMA GFGIEILE
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