| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TBFG_13877 |
|---|
| Symbol | |
|---|
| ID | 5224573 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium tuberculosis F11 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009565 |
|---|
| Strand | - |
|---|
| Start bp | 4328569 |
|---|
| End bp | 4329597 |
|---|
| Gene Length | 1029 bp |
|---|
| Protein Length | 342 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640608653 |
|---|
| Product | transmembrane protein |
|---|
| Protein accession | YP_001289804 |
|---|
| Protein GI | 148825050 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 173 |
|---|
| Plasmid unclonability p-value | 8.876560000000001e-24 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 248 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATCCAAG TGTGCTCCCA GTGCGGAACT GGCTGGAACG TCCGTGAGCG GCAACGCGTG
TGGTGTCCAC GCTGTCGGGG GATGTTGCTG GCGCCGTTGG CGGATATGCC GGCCGAGGCG
CGCTGGCGTA CACCGGCGCG CCCGCAGGTG CCGACGGCCT CCGACACGCG GCGCACACCG
CCGCGGCTTC CCCCAGGTTT TCGGTGGATA GCGGTGCGAC CCGGGGCGGC ACCGCCGCCA
CGGCACGGCC CACGGTTACG TGGGCCTACT CCCCGCTACG CCGGGATACC GCGGTGGGGG
CTAACCGACC ATGTCGACCA GGCTCCCGTG CCGGCCTCGG CGAAAGCAGG GCCATCGCCG
GCGGCGGTGC GCACCACGCT GTTGGTGAGC CTGCTGGTGT TCAGCATCGC GGTCGTGGTG
TTTGTGGTGC GGTATGTGTT GCTGGTCATC AACCGAAACA CATTGTTGAA CTCGGTGGTG
GCTAGCGCCT CGGTCTGGCT GGGGGTTTTG GTCAGCTTGG CGGCGATTGC GGCGGCCGGC
ACTACCATTG TCCTGTTGGT CCGGTGGCTG GTCGCCCGTC GGGCCGCCGC GTTTATGCAT
CAAGGCTTGC CGGAGCGGCG TTCCGCCCGT GAGTTATGGG CCGGCTGCCT ATTGCCGATG
GTCAATCTGC TGTGGGCTCC GCTGTACGTC ATCGAGTTGG CGCTGGTCGA GGACCGCTAC
ACGCGGCTGC GCAGGCCGAT CGTGGTGTGG TGGATCGTGT GGATCGTCAG CAACGCGATA
TCGATGTTCG CGTTCGCCAC CAGCTGGGTC ACCGACGCTC AGGGCATCGC CAACAACACC
ACCATGATGG TGCTGGCGTA TCTGTGTGCG GCGGCCGCGG TGGCCGCTGC TGCGCGGGTC
TTCGAGGGGT TCGAGCAAAA GCCGGTCGAA CGCCCAGCGC ATCGCTGGGT GGTGGTGAAC
ACAGACGGGC GTTCCGCGCC GGCATCTTCT GTTGCGGTTG AGTTGGACGG GCAGGAACCG
GCAGCATAG
|
|---|
| Protein sequence | MIQVCSQCGT GWNVRERQRV WCPRCRGMLL APLADMPAEA RWRTPARPQV PTASDTRRTP
PRLPPGFRWI AVRPGAAPPP RHGPRLRGPT PRYAGIPRWG LTDHVDQAPV PASAKAGPSP
AAVRTTLLVS LLVFSIAVVV FVVRYVLLVI NRNTLLNSVV ASASVWLGVL VSLAAIAAAG
TTIVLLVRWL VARRAAAFMH QGLPERRSAR ELWAGCLLPM VNLLWAPLYV IELALVEDRY
TRLRRPIVVW WIVWIVSNAI SMFAFATSWV TDAQGIANNT TMMVLAYLCA AAAVAAAARV
FEGFEQKPVE RPAHRWVVVN TDGRSAPASS VAVELDGQEP AA
|
|---|
| |