| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TBFG_13815 |
|---|
| Symbol | |
|---|
| ID | 5224511 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium tuberculosis F11 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009565 |
|---|
| Strand | + |
|---|
| Start bp | 4240530 |
|---|
| End bp | 4241351 |
|---|
| Gene Length | 822 bp |
|---|
| Protein Length | 273 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640608591 |
|---|
| Product | O-antigen/lipopolysaccharide transport ATP-binding protein ABC transporter rfbE |
|---|
| Protein accession | YP_001289742 |
|---|
| Protein GI | 148824988 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1134] ABC-type polysaccharide/polyol phosphate transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 469 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 207 |
|---|
| Fosmid unclonability p-value | 0.617285 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCGGATC CGCACCATCC CCATATCCAG ACGCACAACG CGTGGGTGGA GTTCCCTATC
TTCGACGCCA AGTCACGTTC GCTGAAGAAG GCGGTCCTGG GTAAAGCGGG CGGCACCATC
GGGCGCAACA ACTCCAACGT CGTCGTCATC GAAGCGTTGC GCGACATCAC CATGGAGCTG
AACCTGGGTG ACCGGGTCGG TCTGGTCGGA CACAACGGAG CCGGCAAATC GACGCTGCTA
CGCCTGCTTT CGGGCATCTA CGAGCCCACC CGCGGCTGGG CGAAGGTCAC CGGAAGGGTG
GCGCCGGTCT TCGATCTGGG CATCGGCATG GACCCCGAGA TCTCCGGCTA CGAGAACATC
ATCATTCGTG GGCTGTTTCT GGGACAGACC CGCAAACAGA TGCAGGCGAA AGTGGATGAG
ATCGCCGAAT TCACCGAATT GGGCGAGTAC CTTTCGATGC CGCTGCGCAC CTATTCCACC
GGGATGCGAG TCCGCCTGGC GATGGGCGTG GTCACCAGCA TCGACCCAGA GATCCTGTTG
CTCGACGAAG GCATCGGCGC CGTGGACGCC GACTTCCTGA GGAAGGCCCA GTCCCGGCTG
CAGAATTTGG TCGAACGTTC CGGGATCCTG GTTTTCGCAA GCCATTCCAA CGAGTTTTTG
GCTCGACTAT GCAAGACCGC GATATGGATT GACCATGGCG TCATCAGGCT CGCCGGTGGT
ATCGAAGAGG TGGTACGGGC CTACGAGGGT GAGGACGCCG CCCGGCACGT GCGCGAAGTA
CTGGCCGAGA CCCAGGCCGA CAGACAGAAC GTCCAGGGAT GA
|
|---|
| Protein sequence | MSDPHHPHIQ THNAWVEFPI FDAKSRSLKK AVLGKAGGTI GRNNSNVVVI EALRDITMEL
NLGDRVGLVG HNGAGKSTLL RLLSGIYEPT RGWAKVTGRV APVFDLGIGM DPEISGYENI
IIRGLFLGQT RKQMQAKVDE IAEFTELGEY LSMPLRTYST GMRVRLAMGV VTSIDPEILL
LDEGIGAVDA DFLRKAQSRL QNLVERSGIL VFASHSNEFL ARLCKTAIWI DHGVIRLAGG
IEEVVRAYEG EDAARHVREV LAETQADRQN VQG
|
|---|
| |