| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TBFG_13675 |
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| Symbol | |
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| ID | 5224365 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium tuberculosis F11 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009565 |
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| Strand | - |
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| Start bp | 4097456 |
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| End bp | 4100260 |
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| Gene Length | 2805 bp |
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| Protein Length | 934 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640608445 |
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| Product | DNA topoisomerase I |
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| Protein accession | YP_001289602 |
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| Protein GI | 148824848 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01051] DNA topoisomerase I, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 140 |
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| Plasmid unclonability p-value | 0.000348117 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 179 |
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| Fosmid unclonability p-value | 0.0874905 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGCTGACC CGAAAACGAA GGGCCGTGGC AGCGGCGGCA ATGGCAGCGG CCGGCGACTG
GTCATCGTCG AGTCGCCCAC CAAGGCGCGC AAGCTGGCCT CCTACCTGGG CTCTGGCTAC
ATCGTCGAGT CCTCCCGGGG GCACATCCGT GACTTGCCGC GGGCCGCGTC GGATGTACCC
GCAAAGTACA AGTCGCAGCC GTGGGCGCGG CTCGGGGTCA ACGTCGACGC CGACTTCGAA
CCGCTCTACA TCATCAGCCC GGAGAAACGG AGCACCGTCA GCGAGCTCAG GGGCCTGCTC
AAAGACGTGG ACGAGCTGTA TCTGGCCACG GATGGGGACC GTGAGGGCGA AGCTATTGCC
TGGCATCTGC TGGAAACCCT CAAACCGCGC ATACCGGTAA AGCGGATGGT CTTCCACGAG
ATCACCGAAC CGGCGATCCG CGCCGCCGCC GAGCACCCCC GCGACCTAGA CATCGACCTG
GTCGACGCGC AGGAGACCCG GCGCATCCTG GACCGGCTGT ACGGCTACGA AGTCAGCCCA
GTGCTGTGGA AGAAGGTCGC CCCCAAGTTG TCGGCGGGCC GGGTGCAGTC GGTGGCCACC
CGCATCATCG TGGCGCGCGA ACGCGACCGC ATGGCGTTCC GCAGCGCGGC CTACTGGGAC
ATCCTTGCCA AGCTGGATGC CAGCGTGTCC GACCCGGACG CCGCGCCGCC CACCTTCAGC
GCCCGGCTGA CGGCCGTGGC TGGCCGGCGG GTGGCCACTG GCCGCGATTT CGACTCGCTG
GGCACGCTGC GCAAAGGCGA CGAAGTCATT GTGCTCGACG AGGGGAGCGC GACCGCGTTG
GCCGCGGGCC TGGATGGCAC GCAGCTGACC GTGGCCTCGG CCGAGGAGAA GCCCTACGCC
CGGCGCCCGT ACCCGCCGTT CATGACCTCC ACGCTGCAGC AAGAGGCCAG CCGCAAGCTG
CGGTTCTCCG CCGAGCGGAC GATGAGCATC GCCCAGCGGC TGTACGAAAA CGGCTACATC
ACCTATATGC GTACCGACTC CACCACGCTG TCGGAGTCGG CGATCAACGC CGCACGTACC
CAGGCGCGCC AGCTCTACGG CGACGAGTAC GTCGCGCCGG CGCCGCGCCA ATACACCCGC
AAGGTGAAGA ACGCCCAGGA AGCGCACGAG GCTATCCGGC CCGCCGGTGA AACGTTTGCC
ACCCCGGACG CGGTGCGTCG CGAACTCGAC GGTCCCAACA TTGATGATTT CCGGCTCTAT
GAGCTGATTT GGCAACGCAC CGTAGCCTCG CAGATGGCCG ATGCGCGGGG CATGACGCTG
AGCCTGCGGA TCACTGGCAT GTCGGGGCAC CAGGAGGTGG TGTTCTCCGC GACCGGACGC
ACCTTGACGT TCCCGGGCTT CCTCAAGGCC TACGTGGAGA CCGTGGACGA GCTGGTCGGC
GGCGAGGCTG ACGATGCCGA GCGGCGACTG CCCCATCTGA CCCCGGGTCA ACGGTTGGAC
ATCGTCGAGT TGACCCCAGA CGGCCATGCC ACCAACCCGC CGGCCCGCTA CACCGAGGCG
TCGCTGGTCA AAGCGCTCGA GGAGCTGGGC ATCGGCCGCC CGTCGACCTA CTCGTCGATC
ATCAAGACCA TCCAGGATCG CGGCTACGTG CACAAGAAGG GCAGTGCACT GGTGCCGTCA
TGGGTGGCGT TCGCGGTAAC CGGTCTGCTC GAGCAGCATT TCGGTCGGCT CGTCGACTAC
GACTTCACCG CGGCGATGGA AGACGAGCTC GACGAGATCG CCGCCGGCAA CGAGCGCCGC
ACCAACTGGC TCAACAACTT CTACTTTGGT GGCGATCACG GTGTGCCCGA TTCGGTAGCC
CGATCGGGTG GCCTCAAGAA GCTTGTCGGG ATCAATCTCG AGGGCATCGA CGCACGAGAA
GTAAACTCTA TCAAGCTTTT TGACGACACC CACGGACGCC CCATATATGT TCGGGTGGGC
AAGAACGGTC CCTACCTGGA ACGTTTGGTG GCCGGCGACA CCGGTGAGCC CACGCCGCAG
CGGGCCAACC TCAGCGACTC GATTACCCCG GACGAGCTGA CTCTACAGGT GGCCGAAGAG
CTCTTTGCCA CACCGCAACA GGGACGGACT TTGGGCTTGG ACCCAGAAAC CGGCCACGAG
ATCGTGGCCA GGGAAGGCCG GTTTGGGCCG TATGTGACCG AGATCCTGCC GGAGCCTGCG
GCTGATGCGG CCGCGGCCGC TCAGGGAGTC AAGAAACGCC AGAAGGCCGC CGGGCCCAAA
CCGCGCACCG GTTCGTTGCT GCGGAGCATG GACCTACAGA CGGTCACCCT CGAAGACGCG
CTGAGGCTGC TGTCACTGCC GCGCGTGGTC GGAGTGGACC CCGCCTCGGG TGAGGAGATC
ACCGCGCAGA ACGGGCGCTA CGGACCGTAT CTAAAGCGCG GCAACGATTC TCGATCACTG
GTCACCGAAG ACCAGATATT CACCATCACG CTCGACGAAG CCCTGAAGAT CTACGCAGAG
CCGAAACGTC GTGGCCGGCA AAGCGCTTCG GCTCCGCCGC TGCGCGAGCT GGGAACAGAT
CCGGCGTCGG GCAAGCCAAT GGTCATCAAG GACGGCCGAT TCGGGCCGTA CGTCACCGAC
GGTGAGACCA ATGCCAGCAT GCGTAAGGGC GACGACGTGG CTTCCATAAC CGACGAGCGC
GCCGCCGAGC TGTTGGCCGA TCGCCGAGCC CGGGGTCCGG CAAAACGGCC AGCCAGGAAA
GCTGCCCGGA AGGTGCCGGC GAAGAAGGCA GCCAAGCGCG ACTAG
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| Protein sequence | MADPKTKGRG SGGNGSGRRL VIVESPTKAR KLASYLGSGY IVESSRGHIR DLPRAASDVP
AKYKSQPWAR LGVNVDADFE PLYIISPEKR STVSELRGLL KDVDELYLAT DGDREGEAIA
WHLLETLKPR IPVKRMVFHE ITEPAIRAAA EHPRDLDIDL VDAQETRRIL DRLYGYEVSP
VLWKKVAPKL SAGRVQSVAT RIIVARERDR MAFRSAAYWD ILAKLDASVS DPDAAPPTFS
ARLTAVAGRR VATGRDFDSL GTLRKGDEVI VLDEGSATAL AAGLDGTQLT VASAEEKPYA
RRPYPPFMTS TLQQEASRKL RFSAERTMSI AQRLYENGYI TYMRTDSTTL SESAINAART
QARQLYGDEY VAPAPRQYTR KVKNAQEAHE AIRPAGETFA TPDAVRRELD GPNIDDFRLY
ELIWQRTVAS QMADARGMTL SLRITGMSGH QEVVFSATGR TLTFPGFLKA YVETVDELVG
GEADDAERRL PHLTPGQRLD IVELTPDGHA TNPPARYTEA SLVKALEELG IGRPSTYSSI
IKTIQDRGYV HKKGSALVPS WVAFAVTGLL EQHFGRLVDY DFTAAMEDEL DEIAAGNERR
TNWLNNFYFG GDHGVPDSVA RSGGLKKLVG INLEGIDARE VNSIKLFDDT HGRPIYVRVG
KNGPYLERLV AGDTGEPTPQ RANLSDSITP DELTLQVAEE LFATPQQGRT LGLDPETGHE
IVAREGRFGP YVTEILPEPA ADAAAAAQGV KKRQKAAGPK PRTGSLLRSM DLQTVTLEDA
LRLLSLPRVV GVDPASGEEI TAQNGRYGPY LKRGNDSRSL VTEDQIFTIT LDEALKIYAE
PKRRGRQSAS APPLRELGTD PASGKPMVIK DGRFGPYVTD GETNASMRKG DDVASITDER
AAELLADRRA RGPAKRPARK AARKVPAKKA AKRD
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