Gene TBFG_13642 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTBFG_13642 
Symbol 
ID5224331 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium tuberculosis F11 
KingdomBacteria 
Replicon accessionNC_009565 
Strand
Start bp4063382 
End bp4065664 
Gene Length2283 bp 
Protein Length760 aa 
Translation table11 
GC content66% 
IMG OID640608411 
Productcell division protein ftsH (membrane-bound protease) 
Protein accessionYP_001289569 
Protein GI148824816 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0465] ATP-dependent Zn proteases 
TIGRFAM ID[TIGR01241] ATP-dependent metalloprotease FtsH 


Plasmid Coverage information

Num covering plasmid clones285 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones167 
Fosmid unclonability p-value0.0052338 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACCGGA AAAACGTGAC TCGCACCATA ACAGCGATCG CCGTCGTGGT GCTGCTCGGC 
TGGTCGTTCT TTTACTTCAG CGACGACACC CGCGGCTACA AGCCCGTTGA TACCTCGGTG
GCGATAACAC AGATCAACGG CGACAACGTC AAGAGCGCAC AGATCGACGA TCGCGAGCAA
CAGCTGCGGC TGATCCTGAA GAAGGGTAAC AACGAGACCG ACGGGTCCGA GAAGGTCATC
ACCAAGTACC CCACCGGGTA CGCCGTCGAC CTGTTCAACG CGCTCAGCGC CAAAAACGCG
AAGGTCAGCA CGGTCGTCAA CCAGGGCAGC ATCCTGGGCG AGCTGCTGGT CTACGTGCTG
CCGCTGCTGT TGCTGGTGGG GCTGTTCGTG ATGTTCTCCC GCATGCAAGG CGGCGCCCGG
ATGGGCTTCG GGTTCGGCAA GTCACGCGCC AAGCAACTGA GCAAGGACAT GCCCAAGACC
ACCTTCGCCG ACGTCGCAGG TGTCGACGAG GCGGTCGAGG AGCTCTACGA GATCAAGGAC
TTCCTGCAGA ACCCCAGCAG GTACCAAGCG CTGGGCGCCA AGATCCCCAA AGGCGTGCTG
CTCTACGGGC CGCCGGGAAC CGGTAAGACG TTGCTGGCTC GTGCGGTGGC CGGCGAAGCC
GGAGTGCCGT TCTTCACCAT CTCCGGCTCC GACTTCGTCG AAATGTTCGT CGGCGTCGGC
GCATCCCGTG TCAGAGACCT GTTCGAGCAG GCCAAGCAGA ACAGCCCGTG CATCATCTTC
GTCGACGAGA TCGACGCCGT CGGCCGACAA AGAGGCGCCG GGCTGGGCGG CGGTCACGAC
GAGCGTGAGC AGACCCTCAA CCAGTTGCTA GTCGAAATGG ACGGTTTTGG CGATCGCGCC
GGCGTCATCC TGATCGCGGC CACCAACCGG CCCGACATCC TGGACCCGGC GCTGTTGCGG
CCGGGCCGCT TCGACCGCCA GATCCCGGTA TCCAACCCCG ATCTGGCGGG TCGGCGGGCG
GTGCTGCGCG TGCACTCCAA GGGCAAGCCG ATGGCCGCGG ACGCCGACCT CGACGGACTG
GCCAAGCGGA CCGTCGGCAT GACCGGAGCC GACCTGGCCA ACGTCATCAA CGAGGCGGCG
CTGCTGACCG CCCGGGAGAA CGGCACCGTC ATCACCGGTC CCGCCCTCGA GGAAGCGGTG
GACCGGGTGA TCGGCGGCCC GCGCCGCAAA GGCCGGATCA TCAGCGAGCA GGAGAAGAAG
ATCACCGCCT ATCACGAGGG CGGGCACACC CTGGCCGCTT GGGCGATGCC CGATATCGAG
CCGATTTATA AGGTGACGAT CCTGGCGCGC GGGCGTACCG GCGGGCACGC GGTGGCGGTG
CCGGAAGAAG ACAAGGGCCT GCGGACCCGC TCGGAAATGA TCGCGCAACT GGTGTTCGCG
ATGGGTGGGC GCGCCGCCGA AGAACTGGTG TTTCGTGAGC CGACCACCGG CGCGGTGTCC
GACATCGAGC AGGCCACCAA GATAGCGCGC TCAATGGTCA CCGAATTTGG AATGAGCTCC
AAGCTGGGCG CGGTCAAATA CGGCTCCGAA CACGGCGACC CGTTCCTCGG ACGTACCATG
GGCACCCAGC CGGACTACTC CCACGAGGTC GCCCGCGAGA TCGACGAAGA GGTCCGCAAG
CTTATCGAGG CGGCGCATAC CGAAGCGTGG GAAATCCTGA CCGAATACCG CGACGTGCTG
GACACTTTGG CCGGCGAGCT GCTGGAAAAG GAGACCCTGC ACCGACCCGA GCTGGAAAGC
ATCTTCGCTG ACGTCGAAAA GCGGCCGCGG CTCACCATGT TCGACGACTT CGGTGGCCGG
ATCCCGTCGG ACAAACCGCC CATCAAGACA CCCGGCGAGC TCGCGATCGA ACGCGGCGAA
CCTTGGCCCC AGCCGGTCCC CGAGCCGGCG TTCAAGGCGG CGATTGCGCA GGCTACCCAA
GCCGCTGAGG CCGCCCGGTC CGACGCGGGC CAAACCGGGC ACGGCGCCAA CGGTTCGCCC
GCCGGCACCC ACCGGTCCGG TGACCGCCAG TACGGCTCCA CCCAGCCTGA CTACGGTGCC
CCGGCGGGCT GGCATGCGCC GGGATGGCCC CCAAGGTCAT CTCATCGGCC CAGCTATAGC
GGTGAACCGG CACCGACGTA TCCGGGTCAG CCCTACCCGA CCGGTCAAGC CGATCCGGGT
TCCGATGAGT CCTCGGCGGA GCAGGATGAC GAGGTCAGTC GGACCAAGCC GGCCCACGGC
TGA
 
Protein sequence
MNRKNVTRTI TAIAVVVLLG WSFFYFSDDT RGYKPVDTSV AITQINGDNV KSAQIDDREQ 
QLRLILKKGN NETDGSEKVI TKYPTGYAVD LFNALSAKNA KVSTVVNQGS ILGELLVYVL
PLLLLVGLFV MFSRMQGGAR MGFGFGKSRA KQLSKDMPKT TFADVAGVDE AVEELYEIKD
FLQNPSRYQA LGAKIPKGVL LYGPPGTGKT LLARAVAGEA GVPFFTISGS DFVEMFVGVG
ASRVRDLFEQ AKQNSPCIIF VDEIDAVGRQ RGAGLGGGHD EREQTLNQLL VEMDGFGDRA
GVILIAATNR PDILDPALLR PGRFDRQIPV SNPDLAGRRA VLRVHSKGKP MAADADLDGL
AKRTVGMTGA DLANVINEAA LLTARENGTV ITGPALEEAV DRVIGGPRRK GRIISEQEKK
ITAYHEGGHT LAAWAMPDIE PIYKVTILAR GRTGGHAVAV PEEDKGLRTR SEMIAQLVFA
MGGRAAEELV FREPTTGAVS DIEQATKIAR SMVTEFGMSS KLGAVKYGSE HGDPFLGRTM
GTQPDYSHEV AREIDEEVRK LIEAAHTEAW EILTEYRDVL DTLAGELLEK ETLHRPELES
IFADVEKRPR LTMFDDFGGR IPSDKPPIKT PGELAIERGE PWPQPVPEPA FKAAIAQATQ
AAEAARSDAG QTGHGANGSP AGTHRSGDRQ YGSTQPDYGA PAGWHAPGWP PRSSHRPSYS
GEPAPTYPGQ PYPTGQADPG SDESSAEQDD EVSRTKPAHG