Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TBFG_13629 |
Symbol | |
ID | 5224318 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium tuberculosis F11 |
Kingdom | Bacteria |
Replicon accession | NC_009565 |
Strand | - |
Start bp | 4050939 |
End bp | 4053485 |
Gene Length | 2547 bp |
Protein Length | 848 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640608398 |
Product | ATP-dependent protease ATP-binding subunit clpC1 |
Protein accession | YP_001289556 |
Protein GI | 148824802 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 67 |
Plasmid unclonability p-value | 1.1256e-30 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 177 |
Fosmid unclonability p-value | 0.051762 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCGAAC GATTTACCGA CCGTGCCCGC AGGGTCGTCG TCCTGGCTCA GGAAGAGGCC AGGATGCTCA ACCACAACTA CATCGGCACC GAGCACATTC TTTTAGGCCT GATCCATGAA GGGGAAGGCG TTGCCGCCAA GTCACTGGAG TCGTTGGGGA TCTCGCTGGA AGGTGTGCGC AGTCAGGTCG AGGAGATCAT CGGCCAGGGC CAGCAGGCGC CGTCTGGGCA CATTCCGTTT ACCCCCCGCG CCAAAAAGGT CCTCGAGCTG AGCTTGCGTG AAGCGCTGCA GCTTGGCCAC AACTACATCG GGACCGAACA CATTTTGCTG GGCCTCATCC GAGAGGGTGA AGGCGTGGCC GCCCAGGTGC TGGTCAAGCT GGGCGCCGAG CTGACCCGGG TGCGCCAGCA GGTGATCCAG CTGCTCTCCG GTTACCAAGG CAAGGAGGCC GCCGAAGCCG GCACCGGCGG CCGCGGGGGA GAGTCCGGCT CTCCGTCTAC GTCCTTGGTG CTCGACCAGT TCGGCCGCAA CCTCACGGCG GCGGCGATGG AAGGCAAACT GGACCCGGTC ATCGGCCGCG AGAAGGAAAT CGAGCGGGTC ATGCAGGTGC TCTCTCGGCG CACCAAGAAC AACCCGGTGC TGATCGGCGA GCCCGGCGTC GGCAAGACCG CGGTCGTCGA AGGACTGGCG CAGGCCATCG TGCACGGCGA GGTGCCCGAG ACGCTCAAGG ACAAGCAGCT CTACACGCTG GATCTGGGAT CGCTGGTGGC GGGTAGCCGC TACCGCGGTG ACTTCGAGGA ACGCCTCAAG AAGGTGCTCA AGGAGATCAA CACCCGCGGT GACATCATCC TGTTTATCGA CGAGCTGCAC ACCTTGGTCG GTGCTGGAGC CGCCGAGGGC GCGATCGACG CCGCCTCGAT CCTGAAACCG AAGCTCGCTC GCGGTGAACT GCAAACGATC GGCGCCACCA CGCTCGACGA ATACCGCAAG TACATCGAGA AGGACGCCGC GCTGGAGCGC CGCTTCCAGC CGGTGCAGGT GGGTGAGCCG ACGGTGGAGC ACACCATCGA GATCCTCAAG GGCCTGCGGG ACCGGTACGA GGCGCACCAC CGGGTGTCGA TCACCGATGC GGCGATGGTG GCCGCCGCGA CCCTGGCCGA CCGCTACATC AACGACCGGT TCCTGCCCGA CAAGGCGATC GACCTGATCG ACGAGGCGGG TGCTCGGATG CGGATTCGTC GCATGACCGC ACCGCCAGAC CTACGCGAGT TCGATGAGAA GATCGCCGAG GCTCGTCGGG AGAAGGAATC GGCTATCGAC GCCCAGGACT TCGAGAAGGC CGCCAGCCTG CGCGACCGGG AGAAGACACT GGTCGCACAG CGTGCTGAGC GCGAAAAGCA GTGGCGTTCA GGCGATCTTG ACGTGGTCGC GGAGGTCGAC GACGAGCAGA TCGCCGAGGT GCTGGGCAAC TGGACCGGTA TCCCGGTGTT CAAGCTCACC GAGGCCGAGA CCACCCGGCT GTTGCGGATG GAAGAAGAGC TGCACAAGCG GATCATCGGG CAAGAGGACG CCGTCAAGGC CGTTTCCAAG GCCATCCGGC GTACCCGGGC CGGGCTGAAA GACCCCAAGC GCCCGTCGGG CTCGTTCATC TTCGCCGGCC CGTCCGGTGT CGGTAAGACC GAACTGTCCA AGGCGCTGGC CAACTTCTTG TTCGGTGACG ACGACGCGCT TATTCAGATT GACATGGGTG AATTCCACGA CCGGTTCACC GCGTCGCGGC TATTCGGCGC GCCGCCCGGA TACGTCGGCT ACGAGGAGGG CGGCCAACTC ACCGAGAAGG TGCGGCGCAA GCCGTTCTCG GTGGTGCTGT TCGACGAGAT CGAGAAGGCG CATCAGGAGA TCTACAACAG CCTGCTGCAG GTGCTCGAGG ATGGCCGGCT CACCGACGGG CAGGGCCGCA CGGTGGACTT CAAGAACACC GTGCTGATCT TTACGTCCAA TCTGGGCACC TCCGACATCT CTAAGCCGGT CGGTCTGGGC TTTTCCAAGG GCGGCGGTGA GAACGACTAC GAGCGGATGA AACAGAAGGT CAACGACGAG CTGAAGAAAC ACTTCCGCCC GGAGTTCCTC AACCGCATCG ACGACATCAT CGTCTTCCAC CAGCTGACCC GCGAGGAGAT CATCCGGATG GTCGACCTGA TGATCAGCCG GGTCGCCGGC CAGCTCAAGA GCAAGGACAT GGCGCTGGTG CTGACCGATG CGGCCAAGGC GCTGCTGGCC AAGCGTGGCT TCGACCCGGT GTTGGGGGCC CGCCCGTTGC GGCGCACCAT CCAGCGTGAG ATCGAAGATC AGCTCTCGGA GAAGATCCTC TTCGAGGAGG TCGGGCCGGG TCAGGTGGTC ACCGTCGACG TGGACAATTG GGACGGTGAA GGTCCCGGCG AGGACGCGGT GTTCACCTTC ACCGGTACCC GCAAGCCGCC GGCCGAGCCG GATCTGGCCA AGGCTGGAGC GCACAGCGCG GGCGGCCCGG AGCCGGCCGC GCGGTAG
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Protein sequence | MFERFTDRAR RVVVLAQEEA RMLNHNYIGT EHILLGLIHE GEGVAAKSLE SLGISLEGVR SQVEEIIGQG QQAPSGHIPF TPRAKKVLEL SLREALQLGH NYIGTEHILL GLIREGEGVA AQVLVKLGAE LTRVRQQVIQ LLSGYQGKEA AEAGTGGRGG ESGSPSTSLV LDQFGRNLTA AAMEGKLDPV IGREKEIERV MQVLSRRTKN NPVLIGEPGV GKTAVVEGLA QAIVHGEVPE TLKDKQLYTL DLGSLVAGSR YRGDFEERLK KVLKEINTRG DIILFIDELH TLVGAGAAEG AIDAASILKP KLARGELQTI GATTLDEYRK YIEKDAALER RFQPVQVGEP TVEHTIEILK GLRDRYEAHH RVSITDAAMV AAATLADRYI NDRFLPDKAI DLIDEAGARM RIRRMTAPPD LREFDEKIAE ARREKESAID AQDFEKAASL RDREKTLVAQ RAEREKQWRS GDLDVVAEVD DEQIAEVLGN WTGIPVFKLT EAETTRLLRM EEELHKRIIG QEDAVKAVSK AIRRTRAGLK DPKRPSGSFI FAGPSGVGKT ELSKALANFL FGDDDALIQI DMGEFHDRFT ASRLFGAPPG YVGYEEGGQL TEKVRRKPFS VVLFDEIEKA HQEIYNSLLQ VLEDGRLTDG QGRTVDFKNT VLIFTSNLGT SDISKPVGLG FSKGGGENDY ERMKQKVNDE LKKHFRPEFL NRIDDIIVFH QLTREEIIRM VDLMISRVAG QLKSKDMALV LTDAAKALLA KRGFDPVLGA RPLRRTIQRE IEDQLSEKIL FEEVGPGQVV TVDVDNWDGE GPGEDAVFTF TGTRKPPAEP DLAKAGAHSA GGPEPAAR
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