Gene TBFG_13629 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTBFG_13629 
Symbol 
ID5224318 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium tuberculosis F11 
KingdomBacteria 
Replicon accessionNC_009565 
Strand
Start bp4050939 
End bp4053485 
Gene Length2547 bp 
Protein Length848 aa 
Translation table11 
GC content65% 
IMG OID640608398 
ProductATP-dependent protease ATP-binding subunit clpC1 
Protein accessionYP_001289556 
Protein GI148824802 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0542] ATPases with chaperone activity, ATP-binding subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones67 
Plasmid unclonability p-value1.1256e-30 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones177 
Fosmid unclonability p-value0.051762 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGAAC GATTTACCGA CCGTGCCCGC AGGGTCGTCG TCCTGGCTCA GGAAGAGGCC 
AGGATGCTCA ACCACAACTA CATCGGCACC GAGCACATTC TTTTAGGCCT GATCCATGAA
GGGGAAGGCG TTGCCGCCAA GTCACTGGAG TCGTTGGGGA TCTCGCTGGA AGGTGTGCGC
AGTCAGGTCG AGGAGATCAT CGGCCAGGGC CAGCAGGCGC CGTCTGGGCA CATTCCGTTT
ACCCCCCGCG CCAAAAAGGT CCTCGAGCTG AGCTTGCGTG AAGCGCTGCA GCTTGGCCAC
AACTACATCG GGACCGAACA CATTTTGCTG GGCCTCATCC GAGAGGGTGA AGGCGTGGCC
GCCCAGGTGC TGGTCAAGCT GGGCGCCGAG CTGACCCGGG TGCGCCAGCA GGTGATCCAG
CTGCTCTCCG GTTACCAAGG CAAGGAGGCC GCCGAAGCCG GCACCGGCGG CCGCGGGGGA
GAGTCCGGCT CTCCGTCTAC GTCCTTGGTG CTCGACCAGT TCGGCCGCAA CCTCACGGCG
GCGGCGATGG AAGGCAAACT GGACCCGGTC ATCGGCCGCG AGAAGGAAAT CGAGCGGGTC
ATGCAGGTGC TCTCTCGGCG CACCAAGAAC AACCCGGTGC TGATCGGCGA GCCCGGCGTC
GGCAAGACCG CGGTCGTCGA AGGACTGGCG CAGGCCATCG TGCACGGCGA GGTGCCCGAG
ACGCTCAAGG ACAAGCAGCT CTACACGCTG GATCTGGGAT CGCTGGTGGC GGGTAGCCGC
TACCGCGGTG ACTTCGAGGA ACGCCTCAAG AAGGTGCTCA AGGAGATCAA CACCCGCGGT
GACATCATCC TGTTTATCGA CGAGCTGCAC ACCTTGGTCG GTGCTGGAGC CGCCGAGGGC
GCGATCGACG CCGCCTCGAT CCTGAAACCG AAGCTCGCTC GCGGTGAACT GCAAACGATC
GGCGCCACCA CGCTCGACGA ATACCGCAAG TACATCGAGA AGGACGCCGC GCTGGAGCGC
CGCTTCCAGC CGGTGCAGGT GGGTGAGCCG ACGGTGGAGC ACACCATCGA GATCCTCAAG
GGCCTGCGGG ACCGGTACGA GGCGCACCAC CGGGTGTCGA TCACCGATGC GGCGATGGTG
GCCGCCGCGA CCCTGGCCGA CCGCTACATC AACGACCGGT TCCTGCCCGA CAAGGCGATC
GACCTGATCG ACGAGGCGGG TGCTCGGATG CGGATTCGTC GCATGACCGC ACCGCCAGAC
CTACGCGAGT TCGATGAGAA GATCGCCGAG GCTCGTCGGG AGAAGGAATC GGCTATCGAC
GCCCAGGACT TCGAGAAGGC CGCCAGCCTG CGCGACCGGG AGAAGACACT GGTCGCACAG
CGTGCTGAGC GCGAAAAGCA GTGGCGTTCA GGCGATCTTG ACGTGGTCGC GGAGGTCGAC
GACGAGCAGA TCGCCGAGGT GCTGGGCAAC TGGACCGGTA TCCCGGTGTT CAAGCTCACC
GAGGCCGAGA CCACCCGGCT GTTGCGGATG GAAGAAGAGC TGCACAAGCG GATCATCGGG
CAAGAGGACG CCGTCAAGGC CGTTTCCAAG GCCATCCGGC GTACCCGGGC CGGGCTGAAA
GACCCCAAGC GCCCGTCGGG CTCGTTCATC TTCGCCGGCC CGTCCGGTGT CGGTAAGACC
GAACTGTCCA AGGCGCTGGC CAACTTCTTG TTCGGTGACG ACGACGCGCT TATTCAGATT
GACATGGGTG AATTCCACGA CCGGTTCACC GCGTCGCGGC TATTCGGCGC GCCGCCCGGA
TACGTCGGCT ACGAGGAGGG CGGCCAACTC ACCGAGAAGG TGCGGCGCAA GCCGTTCTCG
GTGGTGCTGT TCGACGAGAT CGAGAAGGCG CATCAGGAGA TCTACAACAG CCTGCTGCAG
GTGCTCGAGG ATGGCCGGCT CACCGACGGG CAGGGCCGCA CGGTGGACTT CAAGAACACC
GTGCTGATCT TTACGTCCAA TCTGGGCACC TCCGACATCT CTAAGCCGGT CGGTCTGGGC
TTTTCCAAGG GCGGCGGTGA GAACGACTAC GAGCGGATGA AACAGAAGGT CAACGACGAG
CTGAAGAAAC ACTTCCGCCC GGAGTTCCTC AACCGCATCG ACGACATCAT CGTCTTCCAC
CAGCTGACCC GCGAGGAGAT CATCCGGATG GTCGACCTGA TGATCAGCCG GGTCGCCGGC
CAGCTCAAGA GCAAGGACAT GGCGCTGGTG CTGACCGATG CGGCCAAGGC GCTGCTGGCC
AAGCGTGGCT TCGACCCGGT GTTGGGGGCC CGCCCGTTGC GGCGCACCAT CCAGCGTGAG
ATCGAAGATC AGCTCTCGGA GAAGATCCTC TTCGAGGAGG TCGGGCCGGG TCAGGTGGTC
ACCGTCGACG TGGACAATTG GGACGGTGAA GGTCCCGGCG AGGACGCGGT GTTCACCTTC
ACCGGTACCC GCAAGCCGCC GGCCGAGCCG GATCTGGCCA AGGCTGGAGC GCACAGCGCG
GGCGGCCCGG AGCCGGCCGC GCGGTAG
 
Protein sequence
MFERFTDRAR RVVVLAQEEA RMLNHNYIGT EHILLGLIHE GEGVAAKSLE SLGISLEGVR 
SQVEEIIGQG QQAPSGHIPF TPRAKKVLEL SLREALQLGH NYIGTEHILL GLIREGEGVA
AQVLVKLGAE LTRVRQQVIQ LLSGYQGKEA AEAGTGGRGG ESGSPSTSLV LDQFGRNLTA
AAMEGKLDPV IGREKEIERV MQVLSRRTKN NPVLIGEPGV GKTAVVEGLA QAIVHGEVPE
TLKDKQLYTL DLGSLVAGSR YRGDFEERLK KVLKEINTRG DIILFIDELH TLVGAGAAEG
AIDAASILKP KLARGELQTI GATTLDEYRK YIEKDAALER RFQPVQVGEP TVEHTIEILK
GLRDRYEAHH RVSITDAAMV AAATLADRYI NDRFLPDKAI DLIDEAGARM RIRRMTAPPD
LREFDEKIAE ARREKESAID AQDFEKAASL RDREKTLVAQ RAEREKQWRS GDLDVVAEVD
DEQIAEVLGN WTGIPVFKLT EAETTRLLRM EEELHKRIIG QEDAVKAVSK AIRRTRAGLK
DPKRPSGSFI FAGPSGVGKT ELSKALANFL FGDDDALIQI DMGEFHDRFT ASRLFGAPPG
YVGYEEGGQL TEKVRRKPFS VVLFDEIEKA HQEIYNSLLQ VLEDGRLTDG QGRTVDFKNT
VLIFTSNLGT SDISKPVGLG FSKGGGENDY ERMKQKVNDE LKKHFRPEFL NRIDDIIVFH
QLTREEIIRM VDLMISRVAG QLKSKDMALV LTDAAKALLA KRGFDPVLGA RPLRRTIQRE
IEDQLSEKIL FEEVGPGQVV TVDVDNWDGE GPGEDAVFTF TGTRKPPAEP DLAKAGAHSA
GGPEPAAR