Gene TBFG_13554 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTBFG_13554 
Symbol 
ID5224243 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium tuberculosis F11 
KingdomBacteria 
Replicon accessionNC_009565 
Strand
Start bp3970212 
End bp3971216 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content66% 
IMG OID640608323 
Producthypothetical protein 
Protein accessionYP_001289481 
Protein GI148824727 
COG category[R] General function prediction only 
COG ID[COG1545] Predicted nucleic-acid-binding protein containing a Zn-ribbon 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones408 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones150 
Fosmid unclonability p-value0.0000150735 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGACAGCCA GCTCGAGCGG CCCGGCGCTG ATCGATCACT CTGAGCCGCC CCTTTCCGCG 
CCCCTCACGT TGTCCTTCGA CTACACCCGT TCGGTGGGGC CCACGTTAAG CAGGTTTTTC
ACCGCCTTGC GTGCACGCCG CATTGTCGGG GTGCGCGGAT CCGACGGCCG AGTCCATGTG
CCGCCGGTGG AATATGACCC GGTTACCTAC GAACCCCTGA GCGAAATGGT ACCGGTGTCC
AGCGTCGGCA CCGTCGCGTC CTGGACCTGG CAACCCGAGC CGCTAGCCGG CCAGCCCCTG
GACCGGCCGT TCGCCTGGGC GCTGATCAAG CTCGACGGCG CCGACACCTT GCTGATGCAC
GCCGTTGATG TGGGAACCGC CGGCCCTTCC GCCATCCACA CCGGCGCCCG GGTGCACGCG
CATTGGGCCG ACCAACCGGT GGGCGCCATC ACCGATATCG CCTGCTTTGC GCTCGGCGAG
ACCGCAGAAC CGGTGGCGGC TCACAAGACC GAGGATGCGC GGGACCCGGT CACCATGATC
GTCACGCCGA TCCAGCTGGA AATTCAGCAC ACCGCCTCGC ACGAGGAGAG TGCGTATCTG
CGCGCCATCG CCCAGGGCAA GCTCGTGGGC GCCAGAACCG GAAAGACCGG CAAGGTATAC
TTCCCGCCGC ATGGCGCCGA CCCGGCCACC GGGAAACCCA CCTCCGAGTT TGTCGAGCTG
CCCGACAAGG GCACGGTGAC GACGTTCGCG ATCGTCAACA TCCCGTTCCT GGGCCAGCGA
ATCAAGCCGC CCTATGTGGC GGCCTACGTG TTGCTCGACG GCGCCGACAT CCCGTTTTTG
CATTTGGTTT CCGACGTCGA CGCGCACCAG GTGCGGATGG GCATGCGCGT CGAGGCGGTG
TGGAAGCCGC GGGAGCGGTG GGGACTGGGC ATCGACAACA TCGAGTACTT CCGCCCCACC
GGCGAACCGG ATGCCGACTA CGACACCTAC AAGCACCACC TGTAA
 
Protein sequence
MTASSSGPAL IDHSEPPLSA PLTLSFDYTR SVGPTLSRFF TALRARRIVG VRGSDGRVHV 
PPVEYDPVTY EPLSEMVPVS SVGTVASWTW QPEPLAGQPL DRPFAWALIK LDGADTLLMH
AVDVGTAGPS AIHTGARVHA HWADQPVGAI TDIACFALGE TAEPVAAHKT EDARDPVTMI
VTPIQLEIQH TASHEESAYL RAIAQGKLVG ARTGKTGKVY FPPHGADPAT GKPTSEFVEL
PDKGTVTTFA IVNIPFLGQR IKPPYVAAYV LLDGADIPFL HLVSDVDAHQ VRMGMRVEAV
WKPRERWGLG IDNIEYFRPT GEPDADYDTY KHHL