| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TBFG_13495 |
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| Symbol | rpsD |
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| ID | 5224184 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium tuberculosis F11 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009565 |
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| Strand | - |
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| Start bp | 3892370 |
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| End bp | 3892975 |
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| Gene Length | 606 bp |
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| Protein Length | 201 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640608264 |
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| Product | 30S ribosomal protein S4 |
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| Protein accession | YP_001289422 |
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| Protein GI | 148824668 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0522] Ribosomal protein S4 and related proteins |
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| TIGRFAM ID | [TIGR01017] ribosomal protein S4, bacterial/organelle type |
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Plasmid Coverage information |
| Num covering plasmid clones | 252 |
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| Plasmid unclonability p-value | 0.00000000000412742 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 201 |
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| Fosmid unclonability p-value | 0.375665 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTCGTT ACACCGGACC CGTCACCCGC AAATCACGGC GGTTGCGCAC CGACCTCGTC
GGTGGCGACC AGGCCTTCGA GAAGCGTCCC TACCCGCCCG GCCAACACGG TCGCGCGCGG
ATCAAGGAAA GCGAATATCT GCTTCAGCTG CAGGAGAAGC AGAAGGCCCG TTTCACATAC
GGCGTAATGG AAAAGCAGTT CCGCCGCTAC TACGAAGAGG CCGTGCGGCA GCCCGGCAAG
ACGGGTGAAG AACTGCTGAA GATCCTCGAA AGCCGGCTGG ACAACGTCAT CTACCGTGCC
GGGCTGGCGC GCACCCGGCG GATGGCTCGC CAGCTGGTCA GCCACGGGCA TTTCAACGTC
AACGGCGTGC ACGTCAACGT CCCCAGTTAC CGGGTGTCGC AGTACGACAT CGTCGACGTG
CGGGACAAGT CCCTGAACAC GGTGCCGTTC CAGATTGCCC GGGAGACGGC GGGCGAGCGT
CCGATCCCGA GCTGGCTGCA AGTGGTGGGG GAGCGGCAAC GCGTCCTGAT CCACCAGCTA
CCCGAGCGCG CGCAGATCGA CGTCCCACTC ACCGAGCAGC TGATCGTCGA GTACTACTCA
AAGTAA
|
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| Protein sequence | MARYTGPVTR KSRRLRTDLV GGDQAFEKRP YPPGQHGRAR IKESEYLLQL QEKQKARFTY
GVMEKQFRRY YEEAVRQPGK TGEELLKILE SRLDNVIYRA GLARTRRMAR QLVSHGHFNV
NGVHVNVPSY RVSQYDIVDV RDKSLNTVPF QIARETAGER PIPSWLQVVG ERQRVLIHQL
PERAQIDVPL TEQLIVEYYS K
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