| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TBFG_13469 |
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| Symbol | |
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| ID | 5224158 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium tuberculosis F11 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009565 |
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| Strand | - |
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| Start bp | 3864083 |
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| End bp | 3865465 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640608238 |
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| Product | glutamate decarboxylase gadB |
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| Protein accession | YP_001289396 |
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| Protein GI | 148824642 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
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| TIGRFAM ID | [TIGR01788] glutamate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 297 |
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| Plasmid unclonability p-value | 0.294595 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 163 |
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| Fosmid unclonability p-value | 0.000990947 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGTCTCGCA GTCACCCGTC CGTGCCCGCG CATTCGATCG CTCCGGCCTA CACCGGTCGG
ATGTTCACCG CACCGGTGCC GGCGCTGCGG ATGCCCGATG AGTCGATGGA TCCCGAGGCG
GCCTATCGCT TCATCCACGA CGAGCTGATG CTCGACGGTA GCTCGCGGCT GAATCTGGCC
ACCTTCGTGA CCACCTGGAT GGACCCGGAG GCCGAAAAGC TGATGGCCGA GACGTTCGAC
AAGAACATGA TCGATAAGGA CGAATACCCG GCGACCGCGG CCATCGAGGC GCGCTGTGTG
TCCATGGTCG CCGACCTGTT TCACGCCGAG GGTCTGCGCG ACCACGACCC CACCAGCGCC
ACCGGGGTGT CCACCATCGG CTCCAGCGAG GCGGTGATGC TGGGTGGGCT GGCCCTGAAA
TGGCGTTGGC GGCAACGGGT GGGGTCTTGG AAGGGGCGCA TGCCCAATCT GGTGATGGGT
TCGAACGTCC AGGTGGTGTG GGAGAAGTTC TGCCGCTACT TCGACGTCGA ACCCCGTTAC
CTGCCGATGG AGCGGGGCCG CTACGTCATC ACCCCCGAGC AGGTGCTCGC CGCCGTCGAC
GAGAACACCA TCGGCGTGGT GGCGATCTTG GGCACCACCT ATACCGGTGA ACTCGAACCC
ATCGCCGAGA TCTGCGCCGC GCTGGACAAA CTGGCGGCTG GCGGGGGTGT GGACGTCCCG
GTACACGTCG ACGCGGCCAG TGGGGGCTTT GTGGTGCCGT TTTTGCATCC GGACCTGGTA
TGGGATTTTC GGCTGCCCCG CGTGGTGTCG ATCAACGTCA GCGGCCACAA GTATGGGCTG
ACCTATCCCG GCGTCGGGTT TGTCGTGTGG CGCGGGCCCG AGCACCTGCC GGAGGATCTG
GTTTTCCGGG TCAACTACCT CGGCGGCGAC ATGCCGACCT TCACCCTGAA CTTCTCCCGT
CCCGGTAACC AGGTGGTGGG CCAGTACTAC AACTTCCTGC GGCTGGGGCG CGACGGCTAT
ACCAAGGTGA TGCAGGCGCT GTCGCACACC GCCCGGTGGC TGGGTGACCA GCTGCGCGAG
GTGGATCATT GCGAGGTGAT CTCGGATGGT TCGGCGATCC CGGTGGTCAG CTTCCGGCTC
GCCGGCGACC GCGGGTACAC GGAGTTCGAC GTCTCCCATG AGCTGCGGAC CTTCGGGTGG
CAGGTGCCCG CCTACACCAT GCCGGACAAC GCCACCGACG TGGCGGTGCT GCGGATCGTG
GTTCGGGAAG GACTCTCCGC CGACCTGGCG CGGGCCCTGC ACGACGACGC GGTCACCGCG
TTGGCTGCCC TGGACAAGGT CAAGCCGGGT GGCCACTTCG ACGCACAGCA TTTCGCGCAC
TAG
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| Protein sequence | MSRSHPSVPA HSIAPAYTGR MFTAPVPALR MPDESMDPEA AYRFIHDELM LDGSSRLNLA
TFVTTWMDPE AEKLMAETFD KNMIDKDEYP ATAAIEARCV SMVADLFHAE GLRDHDPTSA
TGVSTIGSSE AVMLGGLALK WRWRQRVGSW KGRMPNLVMG SNVQVVWEKF CRYFDVEPRY
LPMERGRYVI TPEQVLAAVD ENTIGVVAIL GTTYTGELEP IAEICAALDK LAAGGGVDVP
VHVDAASGGF VVPFLHPDLV WDFRLPRVVS INVSGHKYGL TYPGVGFVVW RGPEHLPEDL
VFRVNYLGGD MPTFTLNFSR PGNQVVGQYY NFLRLGRDGY TKVMQALSHT ARWLGDQLRE
VDHCEVISDG SAIPVVSFRL AGDRGYTEFD VSHELRTFGW QVPAYTMPDN ATDVAVLRIV
VREGLSADLA RALHDDAVTA LAALDKVKPG GHFDAQHFAH
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