Gene TBFG_13465 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTBFG_13465 
Symbol 
ID5224154 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium tuberculosis F11 
KingdomBacteria 
Replicon accessionNC_009565 
Strand
Start bp3860876 
End bp3861412 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content56% 
IMG OID640608234 
ProductPPE family protein 
Protein accessionYP_001289392 
Protein GI148824638 
COG category[N] Cell motility 
COG ID[COG5651] PPE-repeat proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones268 
Plasmid unclonability p-value0.000000000213323 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones161 
Fosmid unclonability p-value0.000182876 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCATCCAA TGATACCAGC GGAGTATATC TCCAACATAA TATATGAAGG TCCGGGTGCT 
GACTCATTGT CTGCCGCCGC CGAGCAATTG CGACTAATGT ATAACTCAGC TAACATGACG
GCTAAGTCGC TCACCGACAG GCTCGGCGAG CTGCAGGAGA ACTGGAAAGG TAGTTCGTCG
GACTTGATGG CCGACGCGGC TGGGCGGTAT CTCGACTGGC TGACTAAACA CTCTCGTCAA
ATTCTGGAAA CCGCCTACGT GATCGACTTC CTCGCATACG TCTATGAGGA GACACGTCAC
AAGGTGGTAC CCCCGGCGAC TATCGCCAAC AACCGCGAGG AGGTGCACAG GCTGATCGCG
AGCAACGTGG CCGGGGTAAA CACTCCAGCA ATCGCAGGAC TCGATGCACA ATATCAGCAG
TACCGGGCCC AAAATATCGC TGTCATGAAC GACTATCAAA GTACCGCCCG GTTTATCCTA
GCGTATCTGC CCCGATGGCA GGAGCCGCCG CAGATCTACG GGGGCGGGGG CGGGTAG
 
Protein sequence
MHPMIPAEYI SNIIYEGPGA DSLSAAAEQL RLMYNSANMT AKSLTDRLGE LQENWKGSSS 
DLMADAAGRY LDWLTKHSRQ ILETAYVIDF LAYVYEETRH KVVPPATIAN NREEVHRLIA
SNVAGVNTPA IAGLDAQYQQ YRAQNIAVMN DYQSTARFIL AYLPRWQEPP QIYGGGGG