Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TBFG_13462 |
Symbol | |
ID | 5224151 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium tuberculosis F11 |
Kingdom | Bacteria |
Replicon accession | NC_009565 |
Strand | + |
Start bp | 3858440 |
End bp | 3858982 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640608231 |
Product | PPE family protein |
Protein accession | YP_001289389 |
Protein GI | 148824635 |
COG category | [N] Cell motility |
COG ID | [COG5651] PPE-repeat proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 270 |
Plasmid unclonability p-value | 0.00000000119714 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 156 |
Fosmid unclonability p-value | 0.000040288 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCCTTTCA CATTGACACC AGCGCACCAG ATCTCCTACC AAATGTATGC CGGCCCCGGT GCTGACTCAA TGCGCGCAGC CTCCCAGCAG TTACGAGAAT TGGCTTTCTC AGCTGATACG ACGGCCGACT CGCTCAACGA CACGCTCTTC GACCTAGATG ATACCTGGAT AGGTGGGTCG TCGGCGTTCA TGACCGACGC GGCTTTGCGT TATCTCAAAT GGCTGTCTAA ACACTCCAAA CGGCTTTGGC AAACCGCCAA CACCATCCAC CACCTCGCGA ACACCTATGA GGATATACGT CAGCGGGTGG TACCCCCGGC GGCCATCGAA GACAACCGCG AGGAGGTGCG CAGGCTGATC GCGAGCGACA TAACCGGGGA AAACGCTCCG GCAATCGCAG AACTCGACGA ACAATATCAG TCGTACGGGG ACACCAATGT GCAAGCAATG AACCTCTATG CAGAGCGCGC GCAGACTCTG CTATCGCAGC TGCCCCGGTG GCAGGAGCCG CCGCAGATCC ACCAGAGGGG TAGGGGCGGG TAG
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Protein sequence | MPFTLTPAHQ ISYQMYAGPG ADSMRAASQQ LRELAFSADT TADSLNDTLF DLDDTWIGGS SAFMTDAALR YLKWLSKHSK RLWQTANTIH HLANTYEDIR QRVVPPAAIE DNREEVRRLI ASDITGENAP AIAELDEQYQ SYGDTNVQAM NLYAERAQTL LSQLPRWQEP PQIHQRGRGG
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