| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TBFG_13443 |
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| Symbol | |
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| ID | 5224132 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium tuberculosis F11 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009565 |
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| Strand | - |
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| Start bp | 3838283 |
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| End bp | 3840019 |
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| Gene Length | 1737 bp |
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| Protein Length | 578 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640608212 |
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| Product | cholesterol oxidase precursor choD |
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| Protein accession | YP_001289370 |
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| Protein GI | 148824616 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 249 |
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| Plasmid unclonability p-value | 0.0394432 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 185 |
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| Fosmid unclonability p-value | 0.107199 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCCGG ATTACGACGT CCTGATTATT GGATCGGGTT TCGGGGGCAG CGTCACCGCG
CTGCGGCTGA CGGAAAAGGG CTACCGGGTC GGCGTGCTGG AGGCCGGCCG CCGGTTCTCC
GACGAGGAGT TCGCCAAGAC GTCGTGGGAC CTGCGCAAGT TTCTCTGGGC GCCGAGGTTG
GGCTGCTATG GCATTCAACG TATCCACCCG CTGCGCAACG TGATGATCCT GGCCGGCGCC
GGGGTGGGCG GGGGCTCCCT CAACTACGCC AACACGTTGT ACGTGCCGCC GGAGCCGTTC
TTCGCCGACC AGCAGTGGTC ACACATCACC GACTGGCGTG GCGAGCTGAT GCCGCACTAC
CAGCAGGCGC AGCGGATGCT CGGGGTGGTG CAAAACCCGA CCTTCACCGA CGCCGACCGC
ATCGTCAAGG AGGTCGCCGA CGAGATGGGG TTTGGCGACA CCTGGGTGCC GACCCCGGTT
GGAGTGTTCT TCGGCCCCGA CGGCACCAAG ACGCCCGGCA AGACCGTGCC CGATCCCTAC
TTCGGCGGTG CCGGGCCGGC GCGCACCGGC TGCCTGGAAT GCGGCTGCTG TATGACGGGC
TGTCGCCACG GTGCCAAGAA CACCCTGGTG AAAAACTACC TTGGCCTCGC GGAATCAGCT
GGCGCGCAAG TGATTCCGAT GACCACGGTG AAGGGGTTTG AGCGGCGGTC CGACGGGTTG
TGGGAGGTCC GCACAGTGCG AACCGGCAGT TGGCTGCGCC GGGATCGGCG CACCTTCACC
GCAACGCAGC TGGTGCTGGC CGCGGGCACC TGGGGGACCC AGCATCTGCT GTTCAAGATG
CGGGATAGGG GTCGGCTCCC TGGTCTCTCG AAGCGATTGG GTGTCCTTAC CCGCACCAAC
TCAGAATCGA TCGTCGGGGC CGCCACCTTG AAGGTCAATC CGGACCTGGA CCTGACCCAC
GGCGTGGCGA TCACGTCGTC GATTCACCCG ACGGCCGACA CCCACATCGA ACCCGTGCGC
TACGGCAAAG GCTCCAACGC GATGGGGCTG CTGCAGACCT TGATGACCGA CGGCTCCGGT
CCGCAGGGCA CCGATGTGCC GCGCTGGAGG CAGTTGCTGC AGACCGCCAG TCAGGATCCG
CGCGGCACCA TCCGGATGCT CAATCCCCGG CAATGGAGCG AGCGCACCGT GATCGCGCTG
GTCATGCAGC ACCTGGACAA CTCGATCACC ACGTTCACCA AGCGCGGGAA GCTGGGTATC
CGCTGGTACT CGAGCAAGCA GGGACACGGC GAGCCGAACC CTACATGGAT CCCGATCGGC
AACCAGGTCA CCCGTCGCAT CGCCGCCAAA ATCGACGGCG TGGCCGGCGG CACCTGGGGT
GAGCTGTTCA ACATCCCGCT CACCGCGCAC TTTCTCGGCG GCGCGGTGAT CGGCGACGAC
CCCGAGCACG GCGTCATCGA CCCCTATCAC CGGGTCTATG GCTATCCGAC GCTGTACGTG
GTTGACGGTG CGGCGATCTC GGCGAACCTG GGTGTCAACC CGTCGCTGTC CATCGCCGCT
CAAGCCGAGC GGGCCGCCTC GCTGTGGCCG AACAAGGGCG AAACCGACCG GCGGCCACCG
CAGGGTGAGC CCTATCGTCG GCTGGCGCCG ATCCAACCGG CGCACCCGGT GGTGCCTGCC
GACGCCCCGG GCGCGCTGCG GTGGTTGCCG ATCGATCCGG TCAGCAACGC GGGCTGA
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| Protein sequence | MKPDYDVLII GSGFGGSVTA LRLTEKGYRV GVLEAGRRFS DEEFAKTSWD LRKFLWAPRL
GCYGIQRIHP LRNVMILAGA GVGGGSLNYA NTLYVPPEPF FADQQWSHIT DWRGELMPHY
QQAQRMLGVV QNPTFTDADR IVKEVADEMG FGDTWVPTPV GVFFGPDGTK TPGKTVPDPY
FGGAGPARTG CLECGCCMTG CRHGAKNTLV KNYLGLAESA GAQVIPMTTV KGFERRSDGL
WEVRTVRTGS WLRRDRRTFT ATQLVLAAGT WGTQHLLFKM RDRGRLPGLS KRLGVLTRTN
SESIVGAATL KVNPDLDLTH GVAITSSIHP TADTHIEPVR YGKGSNAMGL LQTLMTDGSG
PQGTDVPRWR QLLQTASQDP RGTIRMLNPR QWSERTVIAL VMQHLDNSIT TFTKRGKLGI
RWYSSKQGHG EPNPTWIPIG NQVTRRIAAK IDGVAGGTWG ELFNIPLTAH FLGGAVIGDD
PEHGVIDPYH RVYGYPTLYV VDGAAISANL GVNPSLSIAA QAERAASLWP NKGETDRRPP
QGEPYRRLAP IQPAHPVVPA DAPGALRWLP IDPVSNAG
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