Gene TBFG_13421 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTBFG_13421 
Symbol 
ID5224110 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium tuberculosis F11 
KingdomBacteria 
Replicon accessionNC_009565 
Strand
Start bp3811903 
End bp3812580 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content66% 
IMG OID640608190 
Producttransposase 
Protein accessionYP_001289348 
Protein GI148824594 
COG category[L] Replication, recombination and repair 
COG ID[COG3039] Transposase and inactivated derivatives, IS5 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones229 
Plasmid unclonability p-value4.43078e-16 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones221 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTACGTA ACGCCCAACG TGCGGTGCGC CGCGCCAGTG GGCGGCGCAA AGCCTGGCTA 
CGCCAGGCCA TCAACCATCT CGAGAAGCTG ATCGGACGCA CCGAGCGGGT GGTGGACCAG
GCCCGTAGCC GGCTGGCCGG GGTAATGCCC GACTCAAGCA GCCGCCTGGT CAGTCTCCAC
GATGCCGACG CTCGCCCGAT CCGCAAGGGA CGATTGGGCA AGCCGGTCGA GTTCGGCTAC
AAGGCCCAGG TCGTCGACAA CGCCGACGGT GTCATCCTGG ACCACAGCGT CGAGCTCGGA
AACCCCGCAG ATGCACCGCA ATTGGCACCC GCCATCGAAC GGATCAGCCG CCGCACCGGA
CGCCCACCAC GGGCAGTGAC CGCTGATCGG GGCTGCGGAG ACGCATCGGT CGAAGATGAT
CTCCACCAGC TCGGGGTGCG CAACGTGGCC ATCCCACGCA AGAGCAAACC CAGCGCCACC
CGCCGCGCAT TCGAACACCG ACGGGCATTC CGCGACAAGA TCAAATGGCG AACCGGATCC
GAAGGACGCA TCAACCACCT CAAGCGCAGC TACGGCTGGA ACCGCACCGA ACTCACCGGC
ATCACCGGCG CCCGAACCTG GTGCGGACAC GGCGTCTTCG CCCACAACCT CGTCAAGATC
AGCACCCTGG CAGCGTGA
 
Protein sequence
MVRNAQRAVR RASGRRKAWL RQAINHLEKL IGRTERVVDQ ARSRLAGVMP DSSSRLVSLH 
DADARPIRKG RLGKPVEFGY KAQVVDNADG VILDHSVELG NPADAPQLAP AIERISRRTG
RPPRAVTADR GCGDASVEDD LHQLGVRNVA IPRKSKPSAT RRAFEHRRAF RDKIKWRTGS
EGRINHLKRS YGWNRTELTG ITGARTWCGH GVFAHNLVKI STLAA