Gene TBFG_13420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTBFG_13420 
Symbol 
ID5224109 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium tuberculosis F11 
KingdomBacteria 
Replicon accessionNC_009565 
Strand
Start bp3811209 
End bp3811913 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content66% 
IMG OID640608189 
Producttransposase 
Protein accessionYP_001289347 
Protein GI148824593 
COG category[L] Replication, recombination and repair 
COG ID[COG3039] Transposase and inactivated derivatives, IS5 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones249 
Plasmid unclonability p-value0.00000000000844303 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones219 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTTCGTA CTGTAGGCGA TCAGGCATCG TTGTGGGAAT CCGTGCTGCC CGAGGAGTTG 
CGGCGGCTGC CCGAAGAGCT GGCCCGGGTG GATGCGCTGC TCGATGATTC GGCGTTCTTC
TGCCCGTTTG TGCCGTTCTT CGACCCGCGG ATGGGTCGGC CGTCCATACC GATGGAGACC
TATTTGCGGT TGATGTTCTT GAAGTTCCGT TACCGGTTGG GCTATGAGTC GCTGTGTCGG
GAGGTCACCG ATTCGATCAC CTGGCGGCGG TTCTGCCGTA TTCCGTTGGA GGGATCGGTG
CCGCACCCAA CCACGTTGAT GAAGCTGACC ACGCGCTGCG GTGAGGATGC GGTGGCCGGG
CTCAATGAGG CGCTGCTGGC CAAGGCGGCC AGCGAAAAGC TGTTGCGCAC CAACAAGGTC
CGTGCCGACA CCACCGTGGT GGAGGGCGAT GTGGGCTATC CCACCGACAC TGGACTGCTC
GCCAAGGCGG TCGGCTCGAT GGCGCGCACC GTGGCGCGGA TCAAAGCCGC GGACGCGGGA
TCGGCGCCGC TCGGTGGGTC GTCGGGCCCG CGCGATCGCC TCCAAGCTGC GGTTACGCGG
CGCGCAGCAA CGCGATCAGG CGCAGGCCTT CGTGCGCCGG ATCACCGGGG AGCTAGCCGG
GATCGCCGAG CAGGCGCTGA CCGAGGCTGC CGCGGTGGTA CGTAA
 
Protein sequence
MFRTVGDQAS LWESVLPEEL RRLPEELARV DALLDDSAFF CPFVPFFDPR MGRPSIPMET 
YLRLMFLKFR YRLGYESLCR EVTDSITWRR FCRIPLEGSV PHPTTLMKLT TRCGEDAVAG
LNEALLAKAA SEKLLRTNKV RADTTVVEGD VGYPTDTGLL AKAVGSMART VARIKAADAG
SAPLGGSSGP RDRLQAAVTR RAATRSGAGL RAPDHRGASR DRRAGADRGC RGGT