Gene TBFG_13417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTBFG_13417 
Symbol 
ID5224106 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium tuberculosis F11 
KingdomBacteria 
Replicon accessionNC_009565 
Strand
Start bp3808554 
End bp3809606 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content61% 
IMG OID640608186 
Productpolyprenyl synthetase idsB 
Protein accessionYP_001289344 
Protein GI148824590 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0142] Geranylgeranyl pyrophosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones366 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones221 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAGGCG TATTGACTCT GGATGCGGCT TTTCTGGGGA GTGTCCCTGC TGACCTTGGG 
AAAGCATTGT TAGAACGGGC TCGAGCGGAT TGTGGCCCTG TGCTGCATCG GGCCATTGAG
TCGATGCGCG AGCCGTTGGC GACGATGGCG GGATATCACC TTGGCTGGTG GAACGCCGAT
CGATCCACAG CGGCAGGATC GTCGGGCAAG TATTTTCGCG CCGCCCTTGT CTACGCGGCG
GCCGCGGCTT GCGGTGGTGA TGTCGGTGAT GCTACTCCGG TGTCGGCGGC TGTGGAGTTG
GTGCACAACT TCACGTTGTT GCATGACGAT GTGATGGATG GGGATGCGAC TCGCAGGGGA
CGGCCGACGG TATGGAGTGT GTGGGGTGTG GGCGGCGCGA TCCTGTTGGG AGATGCGTTG
CACGCCACGG CCGTTCGGAT ACTGACCGGC CTGACCGACG AGTGTGTGGC GGTCAGGGCG
ATAAGGCGAT TGCAGATGTC GTGCCTGGAC TTGTGTATCG GCCAGTTTGA GGATTGTTTA
TTGGAGGGAC AGCCCGAAGT TACAGTCGAT GACTATCTGC GGATGGCCGC GGGCAAGACG
GCCGCCCTGA CCGGTTGTTG TTGCGCTCTG GGAGCTTTAG TGGCCAATGC AGACGACGCG
ACGATTGCTG CGTTGGAGCG TTTTGGCCAT GAGTTGGGTC TTGCGTTTCA ATGCGTCGAC
GATCTGATCG GCATCTGGGG TGACCCTGGT GTGACGGGAA AGCCGGTCGG CAACGACCTT
GCCCGACGTA AGGCGACACT GCCAGTTGTT GCCGCCCTGA ACTCGCGATC CGAAGCGGCG
ACCGAATTGG CGGCCCTCTA TCAAGCACCT GCCGCAATGA CAGCAAGCGA TGTCGAGCGG
GCTACCGCGC TTGTCAAGGT GGCCGGGGGT GGTCATGTGG CGCAGCGATG CGCCGATGAA
CGCATCCAGG CTGCTATTGC GGCACTGCCC GATGCGGTGC GATCCCCAGA CCTGATCGCG
TTGTCGCAAC TGATATGTCG CCGGGAGTGC TGA
 
Protein sequence
MGGVLTLDAA FLGSVPADLG KALLERARAD CGPVLHRAIE SMREPLATMA GYHLGWWNAD 
RSTAAGSSGK YFRAALVYAA AAACGGDVGD ATPVSAAVEL VHNFTLLHDD VMDGDATRRG
RPTVWSVWGV GGAILLGDAL HATAVRILTG LTDECVAVRA IRRLQMSCLD LCIGQFEDCL
LEGQPEVTVD DYLRMAAGKT AALTGCCCAL GALVANADDA TIAALERFGH ELGLAFQCVD
DLIGIWGDPG VTGKPVGNDL ARRKATLPVV AALNSRSEAA TELAALYQAP AAMTASDVER
ATALVKVAGG GHVAQRCADE RIQAAIAALP DAVRSPDLIA LSQLICRREC