| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TBFG_13415 |
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| Symbol | |
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| ID | 5224104 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium tuberculosis F11 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009565 |
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| Strand | - |
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| Start bp | 3805732 |
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| End bp | 3807342 |
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| Gene Length | 1611 bp |
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| Protein Length | 536 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640608184 |
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| Product | 1-deoxy-D-xylulose-5-phosphate synthase |
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| Protein accession | YP_001289342 |
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| Protein GI | 148824588 |
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| COG category | [H] Coenzyme transport and metabolism
[I] Lipid transport and metabolism |
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| COG ID | [COG1154] Deoxyxylulose-5-phosphate synthase |
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| TIGRFAM ID | [TIGR00204] 1-deoxy-D-xylulose-5-phosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 419 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 215 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTCGACA CCGGGCACCA AACCTATCCG CACAAGCTGC TCACCGGCCG CGGTAAAGAC
TTCGCCACGC TGCGCCAGGC CGATGGTCTA TCGGGGTATC CCAACCGCCA TGAATCGCCA
CATGACTGGG TCGAGAACTC CCATGCCTCG GTCAGCCTCG CCTGGGTGGA CGGCATCGCC
AAAGCATTGG CCCTGCAGGG GCAATGCGAC CGACGTGTCA TCGCGGTGAT CGGTGATGGC
GCCCTCACCG GGGGCGTGGC ATGGGAGGGC CTGAACAACC TCGGTGCCGC TACCCGGCCC
GTGATCGTCG TGCTCAATGA CAATGGCCGC TCCTACGACC CCACCGCTGG GGCTCTTGCG
GCACACCTAG AAGAACTTCG CGTCGGCACA CCCCGAGGGC CGAACCTCTT TGAGAACATG
GGATTTACCT ACATCGGTCC GGTCGATGGG CACAACATCC CCGACACGTG CGCGGTTCTA
CGAAAAGCGG CCGCGGCAGC TAGGCCCGTT GTTGTTCACG CAGTGACTAG TAAGGGCCGG
GGTTATCCTC CAGCCGAAGC TGACGAGAGG GACCATATGC ACGCCTGCGG GGTGGTCGAC
ATTGCCACCG GCCTCGCTAG CACACCCAGT CAGCGGAGCT GGACCGACGT GTTCGAGGAC
GAAATCGCGC GCATTGCTGA CGACCGATCC GACGTCGTCG GGCTGACCGC GGCGATGCGT
CTGCCCACTG GTCTAGGCGC GCTGTCGAGG CGATACCCGC ATCGGGTGTT CGATTCGGGC
ATCGCCGAAC AACACCTGTT GGCCAGCGCG GCCGGGCTAG CTGCCGCGGG AACCCATCCC
GTTGTCGCGG TGTACTCGAC GTTTCTGCAC CGCGCCTTTG ACCAACTTCT GTTCGACATC
GGGCTGCACC GGTTACCCGT GACGCTGGTG CTGGACCGGG CTGGGGTAAC CGGGCCCGAC
GGACCCAGCC ATCACGGTTT GTGGGATCTG GCGCTGCTGG CCTGCGTGCC CGGGTTTCAG
ATCGCCTGTC CGCGCGACGC GCCTCGGCTA CGACAACAGT TGCGTACCGC GATCGCGACC
GCGGCTCCCA CCGCCGTGCG TTTCCCCAAA GGGGCGCCGG GCGAACCGAT CACGGCCGAA
CACACCATCG GTGGCCTCGA CGTCTTGCAT ACACCACCAC CGCATTGGCG ACCCGACGTG
CTCTTGGTCG CAGTGGGTGC CATGAGTCGA CCATGCATGG ACGCCGCCCG GTGCCTCAGC
GAGGAGCAGA TCGGGGTGAC AGTCGTTGAT CCACAATGGG TCTGGCCAAT CAGCCCGGCA
CTGACCGAGC TGGCTGGCCG CCATCGGATC ACCGTGTGTG TCGAAGATGC GATTGCCGAC
GTGGGAATCG GCGCGCACCT TAGCCACCAC ATCGGGCGGA CACACCCGCG GACGCGCACC
TACACACTGG GACTGCCACC GGCCTACATT CCCCACGCCA GCCGCGACCA CATCCTTTCC
AGCCACGGAC TCACCGGCCC CGCAATCCGC ATAAGATGCA AATCACTACT TAACGCACTA
CATGAAGTCC CTGGACCCGA AGACCATCCT GATTCCGGCG ATAGTTATTA A
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| Protein sequence | MFDTGHQTYP HKLLTGRGKD FATLRQADGL SGYPNRHESP HDWVENSHAS VSLAWVDGIA
KALALQGQCD RRVIAVIGDG ALTGGVAWEG LNNLGAATRP VIVVLNDNGR SYDPTAGALA
AHLEELRVGT PRGPNLFENM GFTYIGPVDG HNIPDTCAVL RKAAAAARPV VVHAVTSKGR
GYPPAEADER DHMHACGVVD IATGLASTPS QRSWTDVFED EIARIADDRS DVVGLTAAMR
LPTGLGALSR RYPHRVFDSG IAEQHLLASA AGLAAAGTHP VVAVYSTFLH RAFDQLLFDI
GLHRLPVTLV LDRAGVTGPD GPSHHGLWDL ALLACVPGFQ IACPRDAPRL RQQLRTAIAT
AAPTAVRFPK GAPGEPITAE HTIGGLDVLH TPPPHWRPDV LLVAVGAMSR PCMDAARCLS
EEQIGVTVVD PQWVWPISPA LTELAGRHRI TVCVEDAIAD VGIGAHLSHH IGRTHPRTRT
YTLGLPPAYI PHASRDHILS SHGLTGPAIR IRCKSLLNAL HEVPGPEDHP DSGDSY
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