Gene TBFG_13406 details

Gene Information

• Locus tag: TBFG_13406
• Symbol: dnaE2
• ID: 5224094
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Mycobacterium tuberculosis F11
• Kingdom: Bacteria
• Replicon accession: NC_009565
• Strand: -
• Start bp: 3793976
• End bp: 3797215
• Gene Length: 3240 bp
• Protein Length: 1079 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 640608175
• Product: error-prone DNA polymerase
• Protein accession: YP_001289333
• Protein GI: 148824579
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0587] DNA polymerase III, alpha subunit
• TIGRFAM ID: [TIGR00594] DNA-directed DNA polymerase III (polc)

Plasmid Coverage information

• Num covering plasmid clones: 131
• Plasmid unclonability p-value: 0.0998493
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 203
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGAACGGG TGCTTAACGG CAAGCCGCGC CATGCCGGGG TGCCGGCGTT CGACGCGGAT 
GGGGACGTCC CACGGTCCCG CAAGCGCGGG GCGTACCAGC CGCCGGGCCG GGAACGGGTC 
GGATCGTCCG TCGCGTATGC CGAGCTGCAT GCGCATTCGG CGTACAGCTT CCTCGACGGG 
GCCAGCACGC CCGAGGAGTT GGTCGAGGAG GCCGCCCGGC TGGGCCTGTG TGCCCTGGCG 
CTGACCGACC ACGACGGCCT GTACGGGGCG GTGCGGTTCG CCGAAGCGGC CGCGGAACTC 
GACGTGCGCA CGGTCTTCGG CGCCGAGCTG TCACTGGGCG CCACGGCTCG CACCGAGCGG 
CCGGATCCGC CCGGCCCGCA CCTGCTGGTG TTGGCCCGCG GCCCGGAAGG CTACCGGCGG 
TTGTCGCGGC AACTGGCGGC GGCGCATCTG GCCGGCGGCG AAAAGGGTAA GCCGCGCTAC 
GACTTCGACG CGCTAACCGA GGCCGCCGGC GGGCACTGGC ACATCCTGAC TGGCTGCCGC 
AAAGGCCATG TGCGCCAAGC GCTTTCCCAG GGTGGCCCGG CCGCGGCGCA GCGGGCGCTG 
GCCGATCTGG TGGACCGGTT CACCCCCAGC CGGGTCAGCA TCGAGCTGAC CCATCATGGT 
CACCCGCTCG ACGACGAACG CAACGCCGCG CTGGCCGGAC TGGCGCCGCG CTTCGGTGTC 
GGCATCGTCG CCACCACCGG GGCGCACTTC GCGGATCCGT CACGTGGGCG GCTGGCGATG 
GCGATGGCGG CCATCCGGGC CCGGCGGTCG CTGGACTCCG CGGCCGGGTG GCTGGCTCCG 
CTGGGTGGGG CGCACCTGCG GTCCGGGGAG GAGATGGCCC GGTTGTTCGC GTGGTGCCCC 
GAGGCGGTGA CCGCGGCCGC CGAGCTCGGC GAGCGGTGCG CCTTTGGCCT ACAGCTCATC 
GCGCCGCGGC TGCCGCCGTT CGATGTTCCC GACGGGCACA CCGAGGACAG CTGGCTGCGG 
TCGTTGGTCA TGGCGGGCGC CCGCGAGCGT TACGGGCCGC CCAAGAGCGC GCCCCGGGCG 
TACTCCCAGA TCGAGCATGA GCTGAAAGTC ATTGCCCAAC TGAGATTTCC GGGCTACTTC 
CTGGTGGTGC ACGACATCAC CCGGTTTTGC CGGGACAACG ACATCCTGTG TCAGGGCAGG 
GGATCGGCGG CCAACTCCGC GGTCTGCTAT GCCCTGGGCG TCACCGCCGT CGACCCGGTG 
GCCAACGAGC TGTTGTTCGA GCGCTTCTTA TCGCCCGCCC GCGACGGGCC ACCCGACATC 
GACATCGACA TCGAGTCGGA TCAGCGCGAA AAGGTCATCC AGTACGTCTA CCACAAATAC 
GGCCGCGACT ACGCCGCCCA GGTCGCCAAC GTCATCACCT ACCGGGGGCG CAGCGCGGTG 
CGTGACATGG CCCGCGCCCT GGGCTTCTCG CCGGGCCAGC AGGACGCGTG GAGCAAGCAG 
GTCAGCCACT GGACCGGGCA GGCCGACGAC GTTGACGGCA TCCCCGAGCA GGTGATCGAC 
CTGGCCACCC AGATCCGCAA CCTGCCGCGG CACCTAGGCA TCCACTCCGG CGGCATGGTC 
ATCTGCGACC GCCCGATCGC CGACGTGTGC CCGGTGGAAT GGGCGCGCAT GGCCAACCGC 
AGCGTCCTGC AATGGGACAA AGACGACTGC GCGGCAATCG GCTTGGTGAA ATTCGACCTA 
CTCGGGCTGG GCATGCTCTC GGCGCTGCAC TATGCGAAAG ACCTGGTGGC CGAGCACAAG 
GGCATCGAGG TGGACCTGGC CCGCCTCGAC CTCTCCGAGC CGGCGGTGTA TGAGATGCTG 
GCCCGCGCCG ATTCCGTCGG CGTGTTCCAG GTGGAGTCAC GTGCGCAGAT GGCCACCCTG 
CCGCGCCTTA AGCCGCGAGT GTTCTACGAC CTGGTGGTGG AGGTGGCGCT GATCCGCCCC 
GGGCCCATCC AGGGCGGATC GGTGCACCCC TACATCCGGC GGCGCAACGG CGTCGACCCG 
GTCATCTACG AGCACCCGTC GATGGCGCCG GCATTGCGAA AGACGCTGGG AGTGCCGCTG 
TTTCAGGAGC AGCTGATGCA GTTGGCGGTC GACTGCGCCG GCTTTTCCGC CGCCGAGGCC 
GACCAGCTGC GCCGCGCCAT GGGGTCCAAA CGCTCCACCG AACGCATGCG CCGGCTGCGC 
GGCCGGTTCT ACGACGGCAT GCGCGCGCTG CACGGCGCCC CCGACGAGGT GATCGACCGG 
ATCTACGAAA AGCTGGAGGC GTTTGCCAAT TTCGGCTTCC CCGAGAGCCA CGCACTGAGT 
TTCGCGTCGC TGGTGTTCTA CTCGGCGTGG TTCAAGCTGC ACCACCCGGC GGCGTTCTGT 
GCGGCGCTGC TGCGCGCCCA GCCGATGGGT TTCTATTCGC CGCAGTCGCT GGTGGCCGAC 
GCCCGCCGGC ACGGCGTGGC GGTGCACGGC CCGTGTGTCA ATGCCAGCCT GGCGCACGCC 
ACGTGTGAGA ACGCCGGAAC GGAGGTGCGT TTGGGCTTGG GCGCCGTCCG CTACCTCGGC 
GCCGAGCTGG CCGAGAAGCT GGTCGCGGAG CGAACAGCCA ACGGCCCGTT CACCTCCCTG 
CCGGACTTGA CGTCGCGGGT GCAGCTTTCC GTGCCGCAGG TCGAAGCGCT GGCGACGGCC 
GGGGCGCTGG GCTGCTTCGG CATGTCTCGG CGGGAGGCGC TGTGGGCGGC CGGGGCCGCG 
GCCACGGGCC GGCCGGACCG GTTACCCGGG GTGGGCTCGT CGTCGCACAT CCCGGCGCTG 
CCGGGGATGA GCGAGCTGGA GCTGGCCGCC GCCGACGTGT GGGCCACCGG CGTCTCCCCG 
GACAGCTATC CGACCCAGTT CCTGCGGGCG GACCTGGACG CGATGGGGGT GCTGCCCGCC 
GAGAGGCTGG GATCGGTGTC CGACGGCGAC CGCGTGCTGA TCGCCGGCGC GGTGACTCAT 
CGGCAGCGAC CCGCCACGGC CCAGGGGGTG ACGTTCATCA ACCTCGAAGA CGAGACCGGG 
ATGGTCAACG TGCTCTGCAC GCCCGGGGTG TGGGCGCGAC ACCGCAAGCT CGCGCACACG 
GCGCCGGCGC TGCTGATCCG CGGCCAGGTC CAAAACGCCA GCGGCGCAAT CACCGTCGTC 
GCCGAACGGA TGGGCCGCCT CACCCTGGCG GTCGGCGCGC GCTCGCGCGA CTTCCGGTGA 

 

Protein sequence

MERVLNGKPR HAGVPAFDAD GDVPRSRKRG AYQPPGRERV GSSVAYAELH AHSAYSFLDG 
ASTPEELVEE AARLGLCALA LTDHDGLYGA VRFAEAAAEL DVRTVFGAEL SLGATARTER 
PDPPGPHLLV LARGPEGYRR LSRQLAAAHL AGGEKGKPRY DFDALTEAAG GHWHILTGCR 
KGHVRQALSQ GGPAAAQRAL ADLVDRFTPS RVSIELTHHG HPLDDERNAA LAGLAPRFGV 
GIVATTGAHF ADPSRGRLAM AMAAIRARRS LDSAAGWLAP LGGAHLRSGE EMARLFAWCP 
EAVTAAAELG ERCAFGLQLI APRLPPFDVP DGHTEDSWLR SLVMAGARER YGPPKSAPRA 
YSQIEHELKV IAQLRFPGYF LVVHDITRFC RDNDILCQGR GSAANSAVCY ALGVTAVDPV 
ANELLFERFL SPARDGPPDI DIDIESDQRE KVIQYVYHKY GRDYAAQVAN VITYRGRSAV 
RDMARALGFS PGQQDAWSKQ VSHWTGQADD VDGIPEQVID LATQIRNLPR HLGIHSGGMV 
ICDRPIADVC PVEWARMANR SVLQWDKDDC AAIGLVKFDL LGLGMLSALH YAKDLVAEHK 
GIEVDLARLD LSEPAVYEML ARADSVGVFQ VESRAQMATL PRLKPRVFYD LVVEVALIRP 
GPIQGGSVHP YIRRRNGVDP VIYEHPSMAP ALRKTLGVPL FQEQLMQLAV DCAGFSAAEA 
DQLRRAMGSK RSTERMRRLR GRFYDGMRAL HGAPDEVIDR IYEKLEAFAN FGFPESHALS 
FASLVFYSAW FKLHHPAAFC AALLRAQPMG FYSPQSLVAD ARRHGVAVHG PCVNASLAHA 
TCENAGTEVR LGLGAVRYLG AELAEKLVAE RTANGPFTSL PDLTSRVQLS VPQVEALATA 
GALGCFGMSR REALWAAGAA ATGRPDRLPG VGSSSHIPAL PGMSELELAA ADVWATGVSP 
DSYPTQFLRA DLDAMGVLPA ERLGSVSDGD RVLIAGAVTH RQRPATAQGV TFINLEDETG 
MVNVLCTPGV WARHRKLAHT APALLIRGQV QNASGAITVV AERMGRLTLA VGARSRDFR