| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TBFG_13328 |
|---|
| Symbol | |
|---|
| ID | 5224017 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium tuberculosis F11 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009565 |
|---|
| Strand | - |
|---|
| Start bp | 3694766 |
|---|
| End bp | 3697678 |
|---|
| Gene Length | 2913 bp |
|---|
| Protein Length | 970 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640608097 |
|---|
| Product | arylsulfatase atsB (aryl-sulfate sulphohydrolase) |
|---|
| Protein accession | YP_001289255 |
|---|
| Protein GI | 148824501 |
|---|
| COG category | [P] Inorganic ion transport and metabolism
[S] Function unknown |
|---|
| COG ID | [COG3119] Arylsulfatase A and related enzymes
[COG4803] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 137 |
|---|
| Plasmid unclonability p-value | 0.00105728 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 213 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATGAGTG AAGACAACGC GCTGGTGCTC GTCGCCGGCT ATCAGGACCT CGATTCGGCT
CGTCACGATT TTCAAACCCT CGTCGATGCC GCCAAGGACA AAAGCATTCC GCTGCAGGGT
GCGGTGCTGA TCGGCAAGGA CGCCGAGGGC AGTCCGGTTT TGGTCGACAC CGGAAATCGG
CTCGGCCGGC GCGGCGCCGC GTGGGGCGCC GGGGTGGGCC TGGCGATCGG CCTGTTCTCG
CCGGCACTGT TGGCCTCGGC GGCGCTCGGC GCCGCGACCG GAGCATTGGC CGGCACCTTC
GCCCACCATC GGATCAAGAC CGGGCTGGCC GACAAGATCG GCCAAGCGCT GGCGGCGGGC
CGAGCAGTGG TCATCGCCGT GACGGAGGCA CAAGGCCGAC TGGAAGCGGG GCAGGCGTTG
GCTAGCTCTC CAATGAAATC GGTTGCGGAG CTGAGTCGTT CGACGTTGCG AAGCCTGGGT
GCGGCGTTGC GAGAGGCGAT GGGCAAGTTC AACCCAGACC GCACCCGGCT GCCGCTACCG
CAGCGCCGCT TTGGTGGCGT GGTTGGCCGC ACCATGGCAG AGTCGGTCGG CGACTGGTCG
ATTGTCCCCG GTCCCTTTCC GCCCGACGAC GCACCGAATG TGCTGATCGT GTTGATCGAT
GACGCTGGGT TCGGCGGACC GGATACATTC GGCGGCGCGA TCCGAACCCC GACGCTGTCC
CGGCTAGCCC AGAATGGGTT GATCTACAAC CGTTTTCATG TGACCGCGGT GTGCTCGCCG
ACCCGTGCGG CGCTGTTGAC CGGGCGTAAC CATCACCGGG TGGGCTTCGG GTCGGTCTGC
GAGTTCCCCG GCCCGTACCC GGGGTATTCG GCGGTCAGGC CACGCAGTTG CGCAGCGCTG
CCGCGTATTC TGCGCGACAA CGGTTATGTG ACTGGCGCTT TCGGCAAGTG GCATCTGACC
CCGGACAATG TCCAGGGAGC CGCGGGGCCG TTCGACAACT GGCCGCTGGG TTGGGGATTC
GACCATTTCT GGGGCTTCCC GAGCGGCGCC GCGGGTCAGT ACGACCCGAT CATCAGTCAG
GACAACTCCG TCATAGGCAT ACCCGAGGGT TCTGGGGAAG ACGGCCGTCC CTACTATTTC
CCCGACGACC TCACCGACAA GGCTATCGAG TGGCTGCACA CCGTGCGGGC CCAGAATGCC
ACCAAGCCGT GGATGCTGTA CTACGCGACC GGCGCCACCC ACGCGCCACA CCACGTATTC
AAGGAATGGG CCGACAAGTA CCGAGGTGAG TTCGATGATG GCTGGGATGT GTACCGGCAG
AAGACATTCG AACGGCAAAA GCGACTCGGG ATCATTCCAC CCGACGCCGA ACTCACCGAG
CGGCCCGACC TATTCCCCGC GTGGGACAGT ATGTCGGAGG CGCAAAAACG GCTCTTTGCC
CGCCAGATGG AGGTGTTCGC CGGGTTCTCG GAAAATGCGG ACTGGAATGT TGGCCGGCTG
CTGGACGCGA TCGAGGATCT CGGCGAGTCC GACAACACGT TGGTGTTCTA CATCTGGGGC
GACAATGGCG CCAGCATGGA GGGCACCAAC ACCGGTTCGT TCAATGAGAT GACGTTCCTT
AACGGCCTGG ATCTGGATGC CGAGCGGCAA TTGGAGCTGA TCGAACAATA CGGCGGCATC
GCCGCACTCG GCGACGAGTT CACCGCACCG CATTTCGCCA GCGCGTGGGC GCATGCGAGC
AACACCCCGT TGCAGTGGGG CAAGCAGATG GCCAGCCACC TGGGCGGCAC GCGCGATCCA
TTGGTGGTCG CTTGGCCGGC CCGGATCCGG CCAGACGGCC GTGTTCGTAG CCAGTTCACC
CACTGCATCG ACATCGCGCC GACCGTGTTG GCGGCCATCG GTTTACCGGA GCCGACCCAT
GTCGACGGCT TCGAGCAGGA ACCGATGGAC GGAACCAGTT TCGTGCGGAC CTTCGACGAC
GCTGAAGCCG AAGACCGCCA CACCGTGCAG TACTTCGAAA ACTTCGGCAG CCGTGCCATC
TACAAAGACG GCTGGTGGGC GTGCGCTCGC TTGGACAAGG CGCCCTGGGA TCTGTCACCG
GAGACGATGC GACGGTTCGC GCCGGGGACC TACGACCCGG ACCAGGACGT CTGGGAGCTG
TACTACCTAC CAGATGACTT CTCCCAGGCG AAAAACCTGG CAGCCGAGCA TCCCGACAAG
GTCGCCGAGC TCACCCAGCT GTGGTGGCAG GAGGCCGAAC GAAACCGGGT GCTGCCGCTG
CTGGGCGGGC TCGCGGTAAT GTTCGGCGAC CTGCCGCCCC TGCCCACCAC CGCACGGTTC
AGTTTCAAAG GTGACGTGCA GAACATTCAG CGCGGCATGG TCCCCCGTAT CTGCGGTCGT
TCTTACGCGA TCGAGGCACG GCTGCACATC CCCGACGGCG GCGCGCAGGG TGTGATCGTC
GCCAACGCCG ACTTCATGGG AGGGTTCGCG CTATGGGTCG ACGAACAGCG GCACCTGCAC
CACACCTACT CCTTCCTGGG CGTCGAAACC TACCGGCAGG TGTCCAGCGA GCCGCTCCCC
ACCGGGGATG TCACGGTGCG GATGCTGTTC GATTCCCATC AACCCGTCGC CGCCTCCGGT
GGTCGGGTGA CGCTCTGGGC CGACGATCGG TTGATCGGAG AGGGTGAGCT GCCCCAGACG
GTGCCGCTGG CCTTTACCTC CTATGCCGGC ATGGACATCG GCCGCGACAA CGGCCTGGTC
GTTGACCGCG GCTATGAGGA CAAGGCGCCC TATGCGTTCA CCGGGACCGT CACCGAGGTC
ATCTTCGACC TCAAGCCCGT ACATCCCGAA GCCGCCAGGG CGTTGCACGA GCACGCATCG
GTCCAAGCGG TGGGACAGGG CGCCGCGGGC TGA
|
|---|
| Protein sequence | MMSEDNALVL VAGYQDLDSA RHDFQTLVDA AKDKSIPLQG AVLIGKDAEG SPVLVDTGNR
LGRRGAAWGA GVGLAIGLFS PALLASAALG AATGALAGTF AHHRIKTGLA DKIGQALAAG
RAVVIAVTEA QGRLEAGQAL ASSPMKSVAE LSRSTLRSLG AALREAMGKF NPDRTRLPLP
QRRFGGVVGR TMAESVGDWS IVPGPFPPDD APNVLIVLID DAGFGGPDTF GGAIRTPTLS
RLAQNGLIYN RFHVTAVCSP TRAALLTGRN HHRVGFGSVC EFPGPYPGYS AVRPRSCAAL
PRILRDNGYV TGAFGKWHLT PDNVQGAAGP FDNWPLGWGF DHFWGFPSGA AGQYDPIISQ
DNSVIGIPEG SGEDGRPYYF PDDLTDKAIE WLHTVRAQNA TKPWMLYYAT GATHAPHHVF
KEWADKYRGE FDDGWDVYRQ KTFERQKRLG IIPPDAELTE RPDLFPAWDS MSEAQKRLFA
RQMEVFAGFS ENADWNVGRL LDAIEDLGES DNTLVFYIWG DNGASMEGTN TGSFNEMTFL
NGLDLDAERQ LELIEQYGGI AALGDEFTAP HFASAWAHAS NTPLQWGKQM ASHLGGTRDP
LVVAWPARIR PDGRVRSQFT HCIDIAPTVL AAIGLPEPTH VDGFEQEPMD GTSFVRTFDD
AEAEDRHTVQ YFENFGSRAI YKDGWWACAR LDKAPWDLSP ETMRRFAPGT YDPDQDVWEL
YYLPDDFSQA KNLAAEHPDK VAELTQLWWQ EAERNRVLPL LGGLAVMFGD LPPLPTTARF
SFKGDVQNIQ RGMVPRICGR SYAIEARLHI PDGGAQGVIV ANADFMGGFA LWVDEQRHLH
HTYSFLGVET YRQVSSEPLP TGDVTVRMLF DSHQPVAASG GRVTLWADDR LIGEGELPQT
VPLAFTSYAG MDIGRDNGLV VDRGYEDKAP YAFTGTVTEV IFDLKPVHPE AARALHEHAS
VQAVGQGAAG
|
|---|
| |