Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TBFG_13325 |
Symbol | |
ID | 5224014 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium tuberculosis F11 |
Kingdom | Bacteria |
Replicon accession | NC_009565 |
Strand | + |
Start bp | 3688490 |
End bp | 3693031 |
Gene Length | 4542 bp |
Protein Length | 1513 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640608094 |
Product | ATP-dependent helicase lhr |
Protein accession | YP_001289252 |
Protein GI | 148824498 |
COG category | [R] General function prediction only |
COG ID | [COG1201] Lhr-like helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 64 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 207 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGGTTCG CGCAGCCTTC AGCACTGAGC CGATTCAGCG CGCTCACCCG AGACTGGTTC ACCAGCACTT TCGCCGCGCC CACCGCCGCC CAGGCCAGCG CCTGGGCGGC CATCGCAGAC GGCGACAACA CGCTGGTCAT CGCTCCCACC GGATCCGGGA AGACCCTGGC GGCGTTCCTG TGGGCCCTGG ATAGCTTGGC CGGTTCGGAA CCTATGTCCG AGCGGCCGGC GGCCACCCGC GTGCTGTATG TGTCGCCGCT CAAAGCGTTG GCCGTCGACG TCGAGCGCAA CCTGCGCACT CCGCTGGCCG GACTGACCCG ACTCGCCGAA CGCCAGGGTC TGCCCGCGCC CCAGATCAGG GTGGGCGTCC GTTCGGGCGA CACCCCGCCC GCACTTCGCC GCCAGCTCGT CAGCCAGCCG CCCGACGTGC TGATCACCAC CCCGGAGTCA TTGTTTTTGA TGCTCACTTC GGCCGCACGC CAAACTCTGA CCGGTGTGCA GACCGTCATC ATCGACGAAA TTCATGCCAT CGCCGCCACC AAGCGCGGCG CACACCTGGC ACTATCCCTA GAACGGCTCG ACGACCTGTC TAGCCGGCGA CGGGCGCAGC GCATCGGGCT GTCGGCGACC GTACGTCCTC CCGAGGAACT CGCAAGGTTC CTGTCCGGAC AGTCCCCGAC GACCATTGTG GCGCCCCCGG CCGCCAAGAC CGTTGAGCTG TCCGTGCAGG TGCCGGTGCC CGACATGGCC AACTTGACCG ACAACACCAT CTGGCCGGAT GTGGAGGCTC GGCTGGTCGA CCTGATCGAA TCACACAACT CGACCATCGT GTTCGCCAAT TCGCGACGAT TGGCCGAGCG ACTTACCGCA CGGCTCAACG AAATTCACGC CGCGCGCTGC GGGATTGAGC TCGCGCCAGA CACCAACCAG CAGGTTGCCG GCGGCGCCCC GGCGCACATC ATGGGCTCGG GCCAGACGTT CGGAGCGCCG CCGGTGCTGG CCCGCGCCCA CCATGGCTCG ATCAGCAAGG AGCAGCGCGC CGTTGTCGAA GAGGACCTCA AACGCGGGCA ACTCAAAGCG GTGGTGGCGA CGTCCAGCCT GGAGCTGGGC ATCGACATGG GCGCGGTCGA TCTGGTGATC CAAGTACAGG CACCACCATC GGTGGCCAGC GGGCTGCAGC GCATTGGCCG GGCCGGTCAT CAGGTCGGCG AGATTTCGCG GGGGGTGCTG TTTCCCAAGC ATCGCACCGA CCTACTCGGC TGCGCGGTCA GCGTGCAGCG CATGCTTGCC GGTGAGATCG AGACCATGCG GGTGCCGGCC AACCCACTCG ACATTCTGGC CCAGCACACG GTGGCGGCGG CTGCGCTGGA ACCGTTGGAT GCCGACGCGT GGTTCGACAC CGTGCGGCGG GCCGCCCCGT TCGCGACCCT GCCGCGTAGC CTGTTCGAGG CCACCCTGGA CCTGCTGTCC GGCAAGTACC CATCCACCGA GTTCGCTGAG CTGCGGCCGC GGCTGGTGTA TGACCGCGAT ACCGGCACGC TGACCGCGCG ACCCGGAGCC CAGCGACTGG CCGTCACCTC CGGCGGCGCC ATTCCCGATC GCGGGTTGTT CGCCGTCTAC CTCGCTACCG AGCGGCCGTC GCGGGTAGGC GAACTCGACG AGGAAATGGT TTACGAGTCC CGCCCCGGTG ACGTGATCTC GCTGGGTGCC ACCAGCTGGC GAATCACCGA GATCACCCAC GACCGGGTGC TGGTGATCCC CGCGCCGGGC CAGCCGGCCC GATTGCCGTT CTGGCGCGGA GACGATGCCG GCCGCCCCGC CGAGCTCGGC GCCGCACTCG GCGCCCTCAC CGGCGAGCTG GCCGCCCTGG ACCGTACGGC ATTCGGCACA CGTTGTGCGG GTTTGGGTTT CGACGACTAT GCCACCGACA ACCTGTGGCG ACTGCTGGAC GACCAACGCA CCGCTACCGC AGTGGTACCC ACCGACAGCA CATTGTTGGT CGAGCGGTTT CGTGACGAGC TGGGCGATTG GCGGGTGATC TTGCATTCGC CGTATGGGCT GCGGGTGCAC GGACCGCTCG CGCTCGCAGT CGGCCGGCGG CTGCGCGACC GCTATGGCAT CGACGAGAAG CCGACCGCCT CCGACAACGG CATAGTGGTG CGCCTACCGG ACACCGTGTC CGCTGGCGAA GACAGCCCGC CGGGTGCCGA ACTGTTCGTT TTCGACGCCG ACGAGATCGA CCCGATCGTC ACCACCGAAG TGGCCGGTTC GGCGCTGTTC GCGTCACGGT TCCGGGAATC GGCGGCCCGC GCTCTGCTGC TGCCCCGCCG GCACCCCGGC CGCCGCTCGC CGCTGTGGCA GCAGCGGCAG CGCGCCGCCC GGCTGTTGGA AGTGGCCCGC AAATACCCCG ACTTCCCGAT TGTGCTGGAG ACGGTCCGCG AGTGCCTGCA GGACGTCTAT GACGTCCCGA TCTTGGTCGA GCTGATGGCG CGGATCGCCC AGCGGCGGGT GCGTGTCGCC GAAGCCGAGA CCGCCAAACC TTCGCCATTT GCGGCATCGC TGTTGTTCGG CTACGTCGGC GCCTTCATGT ACGAGGGCGA TACGCCGCTG GCCGAACGGC GCGCCGCCGC GCTCGCGCTG GACGGCACGT TGCTGGCCGA GCTGCTAGGC CGGGTGGAGC TGCGCGAGCT GCTCGATCCT GACGTCATCG CCGCTACCAG CCGCCAGCTC CAGCATCTGG CGGCCGACCG GGTAGCCCGT GACGCCGAAG GGGTTGCCGA TCTGCTGCGG CTGCTGGGTC CGCTCACCGA AGACGAGATC GCTGCCCGGG CGGGCGCGCC CGAGGTCAGC GGCTGGCTGG ACGGCTTACG CGCCGCCAAA CGCGCGCTCG TGGTGTCCTT CGCCGGCCGC AGCTGGTGGG TTGCCGTCGA GGACATGGGC CGGCTGCGCG ACGGCGTTGG CGCGGCGGTT CCGGTGGGGC TGCCGGCCAG CTTCACCGAG GCGGTAGCCG ACCCGCTGGG CGAACTACTG GGCCGCTACG CACGCACCCA CACACCGTTC ACCACCGCTG CGGCCGCAGC CCGGTTCGGT CTTGGGCTGC GGGTGACCGC CGACGTGCTG GGCCGGCTGG CCAGCGATGG CCGGCTGGTG CGCGGCGAAT TCGTGGCCGC GGCCAAAGGA TCCGCCGGCG GCGAGCAGTG GTGTGACGCC GAGGTGTTGC GAATTCTGCG GCGCCGCTCG CTGGCCGCAC TGAGGGCGCA GGCAGAGCCG GTCAGCACCG CCGCCTACGG ACGCTTCCTG CCGGCCTGGC AGCACGTTTC CGCGGGCAAC TCGGGCATCG ACGGGCTGGC CGCGGTCATC GATCAGCTCG CCGGCGTCCG GATACCGGCC TCGGCGATCG AACCGCTGGT GCTTGCCCCA CGGATCCGCG ATTACTCGCC GGCGATGCTC GACGAGCTGC TCGCGAGCGG GGACGTCACC TGGTCGGGCG CCGGGTCGAT CTCAGGCAGT GACGGCTGGA TCGCCCTGCA CCCCGCCGAC TCGGCGCCCA TGACGCTGGC GGAGCCGGCC GAGATCGACT TCACCGACGC CCACCGGGCG ATCTTAGCCA GCCTGGGCAC TGGCGGCGCG TACTTCTTCC GCCAGTTGAC CCACGACGGC CTGACCGAGG CGGAACTCAA AGCCGCTCTG TGGGAATTGA TTTGGGCCGG ACGAGTGACC GGCGACACGT TCGCACCGGT ACGCGCGGTA CTCGGCGGGG CGGGCACCCG GAAGCGTGCT GCTCCCGCAC ACGGCGGGCA TCGACCGCCG CGCCTGAGCC GATACCGCCT CACGCACGCC CAGGCCCGCA ACGCTGACCC GACCGTCGCC GGGCGGTGGT CCGCGCTGCC GCTTCCCGAA CCGGACTCCA CGCTGCGCGC CCATTACCAA GCCGAGCTGC TGTTGAACCG CCACGGCGTG TTGACCAAAG ACGCAGTTGC TGCCGAGGGT GTGGCGGGCG GGTTCGCGAC GCTCTACAAG GTGCTCAGTG CGTTCGAGGA TGCCGGCAGG TGCCAGCGTG GCTACTTCAT CGAGTCGTTG GGGGGCGCTC AGTTCGCCGT CGCCTCGACC GTAGACCGGC TGCGTAGCTA CCTCGACGGT GTCGACCCCG AACAGCCGGA CTACCACGCG GTGGTGCTGG CCGCTGCCGA CCCGGCCAAC CCGTATGGGG CGGCGTTGCC CTGGCCAGCG TCGAGCGCTG ACGGTACCGC CCGGCCGGGC CGCAAAGCCG GCGCACTGGT CGTTCTGGTG GACGGCGAGT TGGCCTGGTT CCTCGAGCGC GGCGGGCGGT CGTTGCTGAC GTTCACCGAT GATCCCGAGG CCAACCACGC GGCGGCCATC GGGCTGGCCG ACCTGGTCAC CGCCGGGCGC GTCGCGTCGA TTCTGGTCGA GCGGGCCGAC GGCATGCCGG TGCTGCAGCC CGGCGGGCGG GCGTCGGCGG CACTGACGGC GCTGCTGGCA GCCGGCTTCG TCCGCACACC TCGCGGTCTG CGGCGGCGGT AA
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Protein sequence | MRFAQPSALS RFSALTRDWF TSTFAAPTAA QASAWAAIAD GDNTLVIAPT GSGKTLAAFL WALDSLAGSE PMSERPAATR VLYVSPLKAL AVDVERNLRT PLAGLTRLAE RQGLPAPQIR VGVRSGDTPP ALRRQLVSQP PDVLITTPES LFLMLTSAAR QTLTGVQTVI IDEIHAIAAT KRGAHLALSL ERLDDLSSRR RAQRIGLSAT VRPPEELARF LSGQSPTTIV APPAAKTVEL SVQVPVPDMA NLTDNTIWPD VEARLVDLIE SHNSTIVFAN SRRLAERLTA RLNEIHAARC GIELAPDTNQ QVAGGAPAHI MGSGQTFGAP PVLARAHHGS ISKEQRAVVE EDLKRGQLKA VVATSSLELG IDMGAVDLVI QVQAPPSVAS GLQRIGRAGH QVGEISRGVL FPKHRTDLLG CAVSVQRMLA GEIETMRVPA NPLDILAQHT VAAAALEPLD ADAWFDTVRR AAPFATLPRS LFEATLDLLS GKYPSTEFAE LRPRLVYDRD TGTLTARPGA QRLAVTSGGA IPDRGLFAVY LATERPSRVG ELDEEMVYES RPGDVISLGA TSWRITEITH DRVLVIPAPG QPARLPFWRG DDAGRPAELG AALGALTGEL AALDRTAFGT RCAGLGFDDY ATDNLWRLLD DQRTATAVVP TDSTLLVERF RDELGDWRVI LHSPYGLRVH GPLALAVGRR LRDRYGIDEK PTASDNGIVV RLPDTVSAGE DSPPGAELFV FDADEIDPIV TTEVAGSALF ASRFRESAAR ALLLPRRHPG RRSPLWQQRQ RAARLLEVAR KYPDFPIVLE TVRECLQDVY DVPILVELMA RIAQRRVRVA EAETAKPSPF AASLLFGYVG AFMYEGDTPL AERRAAALAL DGTLLAELLG RVELRELLDP DVIAATSRQL QHLAADRVAR DAEGVADLLR LLGPLTEDEI AARAGAPEVS GWLDGLRAAK RALVVSFAGR SWWVAVEDMG RLRDGVGAAV PVGLPASFTE AVADPLGELL GRYARTHTPF TTAAAAARFG LGLRVTADVL GRLASDGRLV RGEFVAAAKG SAGGEQWCDA EVLRILRRRS LAALRAQAEP VSTAAYGRFL PAWQHVSAGN SGIDGLAAVI DQLAGVRIPA SAIEPLVLAP RIRDYSPAML DELLASGDVT WSGAGSISGS DGWIALHPAD SAPMTLAEPA EIDFTDAHRA ILASLGTGGA YFFRQLTHDG LTEAELKAAL WELIWAGRVT GDTFAPVRAV LGGAGTRKRA APAHGGHRPP RLSRYRLTHA QARNADPTVA GRWSALPLPE PDSTLRAHYQ AELLLNRHGV LTKDAVAAEG VAGGFATLYK VLSAFEDAGR CQRGYFIESL GGAQFAVAST VDRLRSYLDG VDPEQPDYHA VVLAAADPAN PYGAALPWPA SSADGTARPG RKAGALVVLV DGELAWFLER GGRSLLTFTD DPEANHAAAI GLADLVTAGR VASILVERAD GMPVLQPGGR ASAALTALLA AGFVRTPRGL RRR
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