Gene TBFG_13315 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTBFG_13315 
Symbol 
ID5224004 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium tuberculosis F11 
KingdomBacteria 
Replicon accessionNC_009565 
Strand
Start bp3679884 
End bp3680669 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content65% 
IMG OID640608084 
ProductRNA polymerase sigma factor SigF 
Protein accessionYP_001289242 
Protein GI148824488 
COG category[K] Transcription 
COG ID[COG1191] DNA-directed RNA polymerase specialized sigma subunit 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02980] RNA polymerase sigma-70 factor, sigma-B/F/G subfamily 


Plasmid Coverage information

Num covering plasmid clones463 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones240 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGGCGC GCGCTGCCGG CGGTTCTGCA TCGCGAGCTA ACGAATACGC CGACGTTCCG 
GAGATGTTTC GCGAGCTGGT TGGTTTGCCT GCCGGCTCAC CGGAATTCCA GCGGCACCGG
GACAAGATCG TTCAGCGGTG CTTGCCGCTG GCCGATCACA TCGCGCGGCG GTTCGAGGGT
CGCGGCGAAC CGCGTGACGA CCTTATTCAG GTCGCGCGGG TCGGGCTGGT CAACGCCGCG
GTTCGCTTCG ACGTGAAGAC CGGGTCGGAC TTCGTCTCCT TCGCGGTTCC TACCATCATG
GGCGAGGTCC GACGACACTT CCGCGACAAC AGCTGGTCGG TCAAGGTTCC CCGGCGTCTC
AAGGAACTGC ATCTGCGGCT AGGTACCGCC ACCGCCGATT TGTCGCAGCG GCTCGGGCGG
GCGCCGTCGG CATCGGAGCT CGCCGCGGAG CTCGGGATGG ACCGCGCTGA GGTTATCGAA
GGTTTGCTGG CGGGTAGTTC CTACCACACC TTGTCCATCG ACAGCGGTGG CGGCAGCGAC
GACGATGCCC GCGCAATCAC AGACACCCTG GGCGACGTGG ATGCGGGTCT TGACCAGATC
GAGAATCGGG AGGTGCTTCG TCCGTTGCTC GAGGCGTTGC CCGAGCGGGA ACGAACGGTC
TTGGTGCTCA GGTTCTTCGA CTCGATGACC CAAACGCAGA TCGCCGAGCG CGTCGGTATC
TCACAGATGC ACGTGTCGCG GCTGCTGGCC AAGTCATTGG CACGGCTACG GGATCAGTTG
GAGTAG
 
Protein sequence
MTARAAGGSA SRANEYADVP EMFRELVGLP AGSPEFQRHR DKIVQRCLPL ADHIARRFEG 
RGEPRDDLIQ VARVGLVNAA VRFDVKTGSD FVSFAVPTIM GEVRRHFRDN SWSVKVPRRL
KELHLRLGTA TADLSQRLGR APSASELAAE LGMDRAEVIE GLLAGSSYHT LSIDSGGGSD
DDARAITDTL GDVDAGLDQI ENREVLRPLL EALPERERTV LVLRFFDSMT QTQIAERVGI
SQMHVSRLLA KSLARLRDQL E