| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TBFG_13273 |
|---|
| Symbol | |
|---|
| ID | 5223962 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium tuberculosis F11 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009565 |
|---|
| Strand | - |
|---|
| Start bp | 3634937 |
|---|
| End bp | 3636688 |
|---|
| Gene Length | 1752 bp |
|---|
| Protein Length | 583 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640608042 |
|---|
| Product | lipoprotein LpqB |
|---|
| Protein accession | YP_001289200 |
|---|
| Protein GI | 148824446 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 253 |
|---|
| Plasmid unclonability p-value | 0.128269 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 201 |
|---|
| Fosmid unclonability p-value | 0.58651 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGCTGA CAATTTTGTT GTTCCTTGGT GCAGTGCTGG CCGGCTGTGC CAGTGTGCCC
AGCACGTCGG CCCCGCAAGC CATCGGAACC GTCGAACGTC CGGTGCCGTC GAATCTGCCC
AAACCGAGCC CGGGTATGGA TCCCGACGTG CTGTTACGCG AGTTCCTCAA GGCCACAGCC
GACCCGGCCA ACCGGCACCT GGCGGCGCGT CAGTTCCTCA CCGAATCGGC TTCCAACGCC
TGGGACGACG CCGGCAGCGC GTTGTTGATC GACCACGTGG TGTTCGTCGA AACCCGAAGC
GCCGAGAAGG TTTCGGTGAC CATGCGGGCA GACATTCTCG GCTCGCTCTC GGATGTGGGG
GTGTTTGAGA CCGCCGAGGG TCAACTGCCG GATCCGGGCC CGATCGAGTT GGTCAAGACG
TCCGATGGTT GGCGCATCGA TCGCCTACCC AACGGGGTTT TCCTGGACTG GCAGCAGTTC
CAAGAAACGT ACAAGCGCAA CACCCTGTAC TTCGCCGACC CCACCGGCAA GACCGTGGTT
CCCGATCCGC GCTACGTCGC GGTGTCCGAC CGCGACCAGC TGGCCACGGA GCTCGTCTCC
AAACTGCTGG CGGGTCCACG CCCGGAGATG GCGCGCACGG TGCGTAATCT GCTCGCTCCG
CCGCTACGAC TGCGCGGGCC GGTGACTCGG GCCGACGGCG GAAAGAGCGG AATCGGCCGC
GGGTACGGCG GCGCGCGAGT CGACATGGAG AAGCTGTCCA CCACCGATCC GCACAGCAGG
CAATTACTTG CCGCACAGAT CATCTGGACC TTGGCCAGGG CCGACATCAG GGGGCCGTAC
GTGATCAACG CCGACGGCGC CCCGCTGGAA GACAGGTTTG CCGAGGGGTG GACCACTTCC
GATGTCGCGG CCACCGACCC GGGGGTGGCC GACGGTGCCG CCGCGGGGTT GCACGCCTTG
GTGAACGGAT CACTGGTGGC GATGGACGCA CAGCGAGTCA CCCCCGTGCC CGGGGCCTTC
GGACGGATGC CGGAGCAGAC GGCGGCCGCC GTATCACGCA GCGGGCGTCA GGTGGCCTCG
GTGGTGACGC TGGGGCGCGG GGCTCCGGAT GAGGCGGCGT CTTTGTGGGT CGGCGACCTC
GGCGGCGAGG CGGTGCAGTC CGCCGACGGG CACAGCCTGT CGCGGCCCAG CTGGTCGCTG
GACGACGCGG TCTGGGTGGT GGTCGATACC AACGTCGTGC TGCGAGCGAT ACAGGACCCG
GCATCGGGGC AACCCGCGCG GATTCCGGTG GATTCGACCG CGGTGGCCAG CCGCTTCCCG
GGGGCGATCA ACGATCTTCA ACTGTCCCGT GACGGGACGC GCGCCGCGAT GGTGATCGGT
GGGCAGGTGA TCCTCGCCGG CGTCGAGCAG ACCCAGGCTG GCCAGTTCGC CCTGACCTAC
CCTCGGCGGC TGGGTTTCGG GCTGGGTTCC TCGGTGGTGT CGTTGTCCTG GCGAACCGGT
GACGACATCG TGGTGACACG CACCGACGCC GCCCATCCGG TGTCTTATGT AAACCTCGAC
GGGGTGAACT CCGACGCGCC GTCCCGCGGG TTGCAAACTC CACTGACGGC GATCGCGGCC
AACCCGTCGA CTGTGTATGT CGCCGGCCCG CAAGGGGTGT TGATGTACTC GGCGTCTGTC
GAAAGCCGAC CAGGCTGGGC GGACGTACCG GGGCTGATGG TGCCGGGGGC GGCGCCGGTA
TTGCCCGGAT GA
|
|---|
| Protein sequence | MRLTILLFLG AVLAGCASVP STSAPQAIGT VERPVPSNLP KPSPGMDPDV LLREFLKATA
DPANRHLAAR QFLTESASNA WDDAGSALLI DHVVFVETRS AEKVSVTMRA DILGSLSDVG
VFETAEGQLP DPGPIELVKT SDGWRIDRLP NGVFLDWQQF QETYKRNTLY FADPTGKTVV
PDPRYVAVSD RDQLATELVS KLLAGPRPEM ARTVRNLLAP PLRLRGPVTR ADGGKSGIGR
GYGGARVDME KLSTTDPHSR QLLAAQIIWT LARADIRGPY VINADGAPLE DRFAEGWTTS
DVAATDPGVA DGAAAGLHAL VNGSLVAMDA QRVTPVPGAF GRMPEQTAAA VSRSGRQVAS
VVTLGRGAPD EAASLWVGDL GGEAVQSADG HSLSRPSWSL DDAVWVVVDT NVVLRAIQDP
ASGQPARIPV DSTAVASRFP GAINDLQLSR DGTRAAMVIG GQVILAGVEQ TQAGQFALTY
PRRLGFGLGS SVVSLSWRTG DDIVVTRTDA AHPVSYVNLD GVNSDAPSRG LQTPLTAIAA
NPSTVYVAGP QGVLMYSASV ESRPGWADVP GLMVPGAAPV LPG
|
|---|
| |