Gene TBFG_13250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTBFG_13250 
Symbol 
ID5223939 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium tuberculosis F11 
KingdomBacteria 
Replicon accessionNC_009565 
Strand
Start bp3610679 
End bp3611446 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content62% 
IMG OID640608019 
ProductRNA polymerase sigma factor RpoE 
Protein accessionYP_001289177 
Protein GI148824423 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02947] RNA polymerase sigma-70 factor, TIGR02947 family 


Plasmid Coverage information

Num covering plasmid clones411 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones207 
Fosmid unclonability p-value0.787212 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCAACGG CGACGAGCCT GTTGGGTGAG AAGCGGTTGG CTCGCATGCT CGCACGTCCG 
GTGTCCGCGC CGGTGCTGTC CGGCGACACC GCAAACGAAG GGACCCAGTT AATCAAGATG
GCCGACATCG ATGGTGTAAC CGGTTCGGCG GGTCTGCAGC CTGGGCCGTC TGAGGAGACA
GACGAGGAGT TGACCGCGCG TTTCGAGCGC GACGCGATTC CCCTGTTGGA CCAGCTGTAC
GGCGGTGCGC TGCGGATGAC GCGCAATCCG GCCGACGCCG AGGACTTGCT CCAGGAGACG
ATGGTGAAGG CCTATGCGGG ATTTCGTTCG TTCCGGCACG GTACCAATCT CAAGGCCTGG
CTCTACCGGA TACTGACCAA CACCTACATC AACAGCTATC GCAAGAAACA GCGGCAACCG
GCGGAGTATC CGACCGAGCA GATCACCGAT TGGCAACTGG CGTCCAACGC CGAGCATTCC
TCGACCGGGC TGCGCTCGGC TGAAGTCGAA GCGTTAGAAG CGTTGCCGGA CACCGAGATC
AAAGAGGCGC TGCAGGCATT GCCGGAAGAG TTCCGGATGG CGGTCTACTA CGCCGATGTC
GAAGGTTTCC CCTACAAGGA GATCGCCGAG ATCATGGATA CTCCGATCGG CACCGTGATG
TCGAGGCTTC ATCGCGGCCG ACGTCAGTTG CGCGGTCTTT TAGCCGATGT GGCCAGGGAT
CGGGGGTTTG CCAGGGGCGA GCAGGCGCAC GAGGGGGTGT CGTCATGA
 
Protein sequence
MSTATSLLGE KRLARMLARP VSAPVLSGDT ANEGTQLIKM ADIDGVTGSA GLQPGPSEET 
DEELTARFER DAIPLLDQLY GGALRMTRNP ADAEDLLQET MVKAYAGFRS FRHGTNLKAW
LYRILTNTYI NSYRKKQRQP AEYPTEQITD WQLASNAEHS STGLRSAEVE ALEALPDTEI
KEALQALPEE FRMAVYYADV EGFPYKEIAE IMDTPIGTVM SRLHRGRRQL RGLLADVARD
RGFARGEQAH EGVSS