Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TBFG_13250 |
Symbol | |
ID | 5223939 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium tuberculosis F11 |
Kingdom | Bacteria |
Replicon accession | NC_009565 |
Strand | - |
Start bp | 3610679 |
End bp | 3611446 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640608019 |
Product | RNA polymerase sigma factor RpoE |
Protein accession | YP_001289177 |
Protein GI | 148824423 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family [TIGR02947] RNA polymerase sigma-70 factor, TIGR02947 family |
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Plasmid Coverage information |
Num covering plasmid clones | 411 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 207 |
Fosmid unclonability p-value | 0.787212 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCAACGG CGACGAGCCT GTTGGGTGAG AAGCGGTTGG CTCGCATGCT CGCACGTCCG GTGTCCGCGC CGGTGCTGTC CGGCGACACC GCAAACGAAG GGACCCAGTT AATCAAGATG GCCGACATCG ATGGTGTAAC CGGTTCGGCG GGTCTGCAGC CTGGGCCGTC TGAGGAGACA GACGAGGAGT TGACCGCGCG TTTCGAGCGC GACGCGATTC CCCTGTTGGA CCAGCTGTAC GGCGGTGCGC TGCGGATGAC GCGCAATCCG GCCGACGCCG AGGACTTGCT CCAGGAGACG ATGGTGAAGG CCTATGCGGG ATTTCGTTCG TTCCGGCACG GTACCAATCT CAAGGCCTGG CTCTACCGGA TACTGACCAA CACCTACATC AACAGCTATC GCAAGAAACA GCGGCAACCG GCGGAGTATC CGACCGAGCA GATCACCGAT TGGCAACTGG CGTCCAACGC CGAGCATTCC TCGACCGGGC TGCGCTCGGC TGAAGTCGAA GCGTTAGAAG CGTTGCCGGA CACCGAGATC AAAGAGGCGC TGCAGGCATT GCCGGAAGAG TTCCGGATGG CGGTCTACTA CGCCGATGTC GAAGGTTTCC CCTACAAGGA GATCGCCGAG ATCATGGATA CTCCGATCGG CACCGTGATG TCGAGGCTTC ATCGCGGCCG ACGTCAGTTG CGCGGTCTTT TAGCCGATGT GGCCAGGGAT CGGGGGTTTG CCAGGGGCGA GCAGGCGCAC GAGGGGGTGT CGTCATGA
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Protein sequence | MSTATSLLGE KRLARMLARP VSAPVLSGDT ANEGTQLIKM ADIDGVTGSA GLQPGPSEET DEELTARFER DAIPLLDQLY GGALRMTRNP ADAEDLLQET MVKAYAGFRS FRHGTNLKAW LYRILTNTYI NSYRKKQRQP AEYPTEQITD WQLASNAEHS STGLRSAEVE ALEALPDTEI KEALQALPEE FRMAVYYADV EGFPYKEIAE IMDTPIGTVM SRLHRGRRQL RGLLADVARD RGFARGEQAH EGVSS
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