Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TBFG_13225 |
Symbol | |
ID | 5223914 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium tuberculosis F11 |
Kingdom | Bacteria |
Replicon accession | NC_009565 |
Strand | - |
Start bp | 3588798 |
End bp | 3591965 |
Gene Length | 3168 bp |
Protein Length | 1055 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640607994 |
Product | ATP-dependent DNA helicase |
Protein accession | YP_001289152 |
Protein GI | 148824398 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0210] Superfamily I DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 176 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 209 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCACATA TCTGGGGTGT CGAGGCGGGT GCGGCCCTCG CGCCGGGTTT GCGCGGTCCG GTGCTTGTGC TGGGCGGCCC GGGCACCGGT AAGAGCACAC TGTTGGTTGA GGCCGCGGTC GCTCACATCG GCGCCGGCAC CGACCCGGAG TCGGTTCTGC TGCTGACCGG TTCCGGCCGA ATGGGCATGC GGGCCCGCAG TGCGCTGACG ACGGCGCTGC TGCGGTCGCG CACCAACGGC CCTTGCCGGG CGGCGATCCG CGAACCGGTG GTACGCACCG TGCACAGCTA CGCCTATGCG GTCTTGCGCA AGGCCGCACA GCGCGCCGGT GACGCCTTGC CGCGGCTGCT TACCAGCGCC GAGCAGGACG CCATCATTCG GGAACTGCTG GCCGGGGACG CCGAAGACGG ACCGGCCGCC ACCACCACCT GGCCTGCGCA TCTGCGGCCC GCGCTGACTA CCGCCGGCTT CGCCACCGAG CTGCGAAACC TGTTGGCACG TTGCGCCGAA CGCGGCCTGG ACCCGCTGGA GTTGCAGCAA CTGGGCCGTC GCCGCGGCCG TCCGGAATGG ATCGCCGCCG GTCAATTCGC CCAGCGGTAC GAGCAGGTGA TGTTGTTGCG GGGTGCGGTG GGGCTGGCGG CGCCGCAGGC CACGGCGCCG GCGCTGAGTG CCGCCGAACT GGTGGGGGCA GCTTTGGAGG CCTTCGCGGT CGATCCTGAG TTACTGGCCG CCGAACGCGC CCGGGTCCGG ACCCTTTTGG TCGACGACGC CCAACAACTT GATCCGCAGG CGGCACGCCT GGTCCGGATG CTGGCGGCGG GCACCGAGCT GGCCCTGATC GCCGGTGATC CGAACCAAGC GGTGTTCGGG TTCCGCGGCG GCGAGCCCAC CGGCCTGCTG GCCGACGATC CGCCGCCAGC AGGTGGTGCC CCCATTCCGT CGGTGACGTT GACGGTCTCT CATCGGTGTG CACCCGCCGT GGCGCGGGCC GTCACCGGCA TCGCACGACG GCTACCGGGT CGAAGCGTCG GTCGGCGAAT CGAGGGCACC GGGACCGAGG TCGGATCGGT GACGGTGCGC CTGGCCGGTT CGGCGCACGC TGAGGCAGCG ATGATTGCCG ACGCGCTGCG ACGCGCGCAC CTGATCGATG GGGTGCCTTG GTCGCAGATG GCGGTGATCG TCAGGTCGGT GCCGCGCGCT GTGCGGTTGC CGCGCGCTCT GGCCGCCGCC GGGGTGCCGG TGGCCCCACC TGCAGTTGGC GGGCCGTTGT CCGCGGAGCC GGCGGTACGG GCGCTGCTCA CGGTGCTCGA GGCGACGGCT GACGGGCTCG ACGGCGACCA GGCGCTGCTC CTGCTCACCG GGCCGATTGG TGGTGTGGAC CCGGTATCAC TTCGCCAGCT GCGCCGGACT CTGCAACGCG CACGTCCCGG CCAGACTTCG AGGAAGTTCG GCGACCTGCT GGTGGAAGTG CTCGGCGGCG ACGCGCCGCC ATCGGGGCCA GGGTCGCGGG CACTGCGGCG CGTGCGTGCC GTGCTGACCG CGGCCGCGCG CTGCCACCGC TCAGGAAGTC TGGGTGGCCA GGATCCGCGC CACACGCTAT GGGCTGCCTG GCAACGGTCG GGTCTGCAAC GCCGCTGGCT GGCGGCCAGC GAGCATGGTG GTGCGGCGGC TGTCCAGGCC ACCCGGGACC TGGAAACGGT GACCGCCTTG TTCGACATCA CCGACCATTA CGTGTCCCGC ACCTCGGGTG CGTCCCTGCG CGGACTCGTC GAGCACGTCA CCGCGCTGCA GCTGCCGGTT GTGCGACCCG AACCGGCAGC CCCGACAGAG CAGGTCATGG TCCTTAGCGC ACATGCCGCG CTGGGACACG AATGGGATCT GGTAGTTATC GCCGGCCTAC AGGACGGCTT GTGGCCCAAC ACGGTTCCAC GTGGCGGTGT GCTTGGCACC CAGCGGCTGC TGGACGAACT CGACGGTGTC ACGAAGGATG CCTCGATGCG CGCGCCGTTG CTGGCCGAGG AGCGCCGGCT GCTGGTGACC GCGATGGGGC GGGCCCGGCG GCGGTTGCTG GTGACCGCCG TAGATAGCGA CGCGGGCGGG GGCGGGCACG AGGCGGTGCT GCCATCGGCG TTCTTTTTCG AGATTGCCCA GTGGGCCGAC GGCGATGGCG AACCCGTCGC GATGCAGCCG GTCTCGGCGC CGCGCGTGTT GTCGGCTGCG GCGGTGGTAG GCCGGTTACG CGTTGTGGTG TGCGCGCCTG CCTGCGCGGT AGATGACGCC GATCGCGATT GTGCGGCAAC GCAATTGGCC CGGTTGGCCA AAGCCGGTGT GCCAGGTGCC GACCCGTCCG AGTGGCATGG CCTGGCCCCG GTCAGCACGA GTGATCCGTT GTGCGATAGC GACGATCTCG TCACGTTGAC GCCGTCGACT TTGCAGGCAC TCAACGACTG CCCACTGCGC TGGCTGGCCG AGCGGCACGG CGGAACAAAC ACCCGCGAGC TGCCGTCTGC CGTCGGATCG GTGTTGCACG CACTGTTTGC CGAGCCGGGC AGGAGCGAAT CCCAACTGCT GGCTGAACTG GACCGGGTGT GGGGCCATCT GCCGTTCGGC GCTCAGTGGT ATTCGGCCAA CGAGCTTGCC CGGCACCGCG CGATGATCCA GGCGTTCGTA CAGTGGCGAG CTCAGAGTCG ATCCGAGCTG ACCGAAGTTG GCGTGGAGGT CGACATCGAT GGGGCCCTCG AGGACGGTAG CGGTCAAGCC AGAAAAATTC GGTTGCGTGG CCGGGCGGAT CGGCTGGAAC GCGACCCGGC CGGCCGCCTG GTGATCGTCG ACATCAAAAC CGGCAAGACA CCGGTCAGCA AGGACGATGC CCAGCAGCAC GCCCAGCTGG CGATGTATCA GCTGGCGGTG GCCGAAGGCT TGGTGCGCGC CGGGGACGAG CCCGGCGGTG CCCGGCTGGT CTATGTCGGC AAAAGCGGGG CCGCTGGCGT CGCCGAACGC AAACAGGATC CACTCACACC GGCCGCGCGC GACGAATGGC GCAACCTCGT CCGGCAGCTG GCCGCGGCGA CAGCCGGTCC CCAGTTCATC GCTCGGCGCA ACGACGGGTG CACCCACTGC CCGCTGCGGC CGGGCTGTCC GGCCCACGTC CGAGGGTCGG CGCCATGA
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Protein sequence | MSHIWGVEAG AALAPGLRGP VLVLGGPGTG KSTLLVEAAV AHIGAGTDPE SVLLLTGSGR MGMRARSALT TALLRSRTNG PCRAAIREPV VRTVHSYAYA VLRKAAQRAG DALPRLLTSA EQDAIIRELL AGDAEDGPAA TTTWPAHLRP ALTTAGFATE LRNLLARCAE RGLDPLELQQ LGRRRGRPEW IAAGQFAQRY EQVMLLRGAV GLAAPQATAP ALSAAELVGA ALEAFAVDPE LLAAERARVR TLLVDDAQQL DPQAARLVRM LAAGTELALI AGDPNQAVFG FRGGEPTGLL ADDPPPAGGA PIPSVTLTVS HRCAPAVARA VTGIARRLPG RSVGRRIEGT GTEVGSVTVR LAGSAHAEAA MIADALRRAH LIDGVPWSQM AVIVRSVPRA VRLPRALAAA GVPVAPPAVG GPLSAEPAVR ALLTVLEATA DGLDGDQALL LLTGPIGGVD PVSLRQLRRT LQRARPGQTS RKFGDLLVEV LGGDAPPSGP GSRALRRVRA VLTAAARCHR SGSLGGQDPR HTLWAAWQRS GLQRRWLAAS EHGGAAAVQA TRDLETVTAL FDITDHYVSR TSGASLRGLV EHVTALQLPV VRPEPAAPTE QVMVLSAHAA LGHEWDLVVI AGLQDGLWPN TVPRGGVLGT QRLLDELDGV TKDASMRAPL LAEERRLLVT AMGRARRRLL VTAVDSDAGG GGHEAVLPSA FFFEIAQWAD GDGEPVAMQP VSAPRVLSAA AVVGRLRVVV CAPACAVDDA DRDCAATQLA RLAKAGVPGA DPSEWHGLAP VSTSDPLCDS DDLVTLTPST LQALNDCPLR WLAERHGGTN TRELPSAVGS VLHALFAEPG RSESQLLAEL DRVWGHLPFG AQWYSANELA RHRAMIQAFV QWRAQSRSEL TEVGVEVDID GALEDGSGQA RKIRLRGRAD RLERDPAGRL VIVDIKTGKT PVSKDDAQQH AQLAMYQLAV AEGLVRAGDE PGGARLVYVG KSGAAGVAER KQDPLTPAAR DEWRNLVRQL AAATAGPQFI ARRNDGCTHC PLRPGCPAHV RGSAP
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