| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TBFG_13196 |
|---|
| Symbol | |
|---|
| ID | 5223884 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium tuberculosis F11 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009565 |
|---|
| Strand | + |
|---|
| Start bp | 3555983 |
|---|
| End bp | 3557470 |
|---|
| Gene Length | 1488 bp |
|---|
| Protein Length | 495 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640607964 |
|---|
| Product | amidase |
|---|
| Protein accession | YP_001289123 |
|---|
| Protein GI | 148824369 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 336 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 199 |
|---|
| Fosmid unclonability p-value | 0.471153 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCATGT CCGCCAAGGC CTCAGACGAT ATTGCCTGGC TACCGGCGAC CGCTCAACTC
GCGGTGCTCG CCGCCAAGAA GGTGTCCAGC GCGGAGTTAG TCGAGCTGTA TCTTTCCCGA
ATCGACACGT ACAACGCGTC GCTCAACGCG ATCGTCACCG TTGACCCCGA CGCCGCCCGA
CGCGTCGCCA AGCGGTCCGA TGCGGCACGA GCCCGCGGCG ACGAACTCGG CCCGTTGCAT
GGGTTGCCGA TCACCGTCAA GGACAGCTAT GAGACGGCCG GCATGCGCAC GACCTGCGGT
CGCCGCGACC TTGCCGACTA TGTACCCACC CAGGACGCCG AGGCGGTCGC CCGGTTGCGC
CGGGCCGGCG CGATCATCAT GGGCAAGACA AACATGCCCA CCGGCAACCA GGACGTCCAG
GCCAGCAATC CGGTCTTCGG CCGCACCAAC AACCCATGGG ACGCCGCGCG CACGTCCGGC
GGCTCGGCCG GCGGCGGGGC GGCCGCCACC GCGGCCGGGC TGACCAGCTT CGACTACGGC
TCGGAGATCG GCGGCTCTAC CAGGATCCCG GCTCATTACT GCGGTCTGTA CGGCCACAAA
TCGACCTGGC GCTCGGTTCC TCTGGTCGGG CACATTCCCA GCGCACCAGG TAATCCCGGG
CGATGGGGGC AAGCCGACAT GGCCTGCGCG GGCGTGCAGG TGCGCGGTGC CCGCGACATC
ATCCCCGCAC TGGAGGCGAC CGTCGGGCCG ATGCGGGCGG ACGGAGGATT CTCGTATGCG
CTCGCTCCGC CACGAGCCGG CGCGCTCAAA GACTTCCGGG TCGCGGTCTG GGCCGAGGAC
CCGCATTGCC CAATTGACGC CGACGTGCGT CGGGCCATGG ATGATGCTGT CGCCGCGCTG
CGCGCCGCGG GCGCACACGT CGTTGAGCAG CCCGCCACCA TCCCGGTCGA TATGGCGGTG
TCGCACAACA TCTTCCAGAG TCTGGTGTTC GGCGCCTTCG CTGTCGACCG GTCCACCCTC
AGCCCAGCCT CCGCCGCCGC GCTCGGATTA CGCGCGGTTC GGCATCCTCG GGGCGAAGCC
GCCAACGCCC TGGGTGCGAC GCTACAGAGC CACCGTGCGT GGTTGTTCGC CGATGCGGCG
CGCCACGAAA TGCGCGACCG GTGGGCCGGA TTCTTCAACG AGTTCGACGT GCTGCTCCTG
CCCGTCACGC CCACCCCCGC GCCGCTCCAC CACAACAAGG ACCACGACCG GTTGGGCCGC
ACCATCGACG TCGACGGCGT CTCACGATCG TACTGGGACC AACTCAAATG GAACGCGCTG
GCCAACATCG CCGGCACCCC GGCCACCACC ATGCCCATCA CCACCACAGC TACCGGACTC
CCGATCGGCA TCCAGGCGAT GGGGCCCGCG GGCGGAGACC GCACCACCGT AGAGTTCGCC
GCCCTGCTCA CCGAAGTCCT AGGCGGCTTC CGCGTTCCCC CTCTTTAG
|
|---|
| Protein sequence | MAMSAKASDD IAWLPATAQL AVLAAKKVSS AELVELYLSR IDTYNASLNA IVTVDPDAAR
RVAKRSDAAR ARGDELGPLH GLPITVKDSY ETAGMRTTCG RRDLADYVPT QDAEAVARLR
RAGAIIMGKT NMPTGNQDVQ ASNPVFGRTN NPWDAARTSG GSAGGGAAAT AAGLTSFDYG
SEIGGSTRIP AHYCGLYGHK STWRSVPLVG HIPSAPGNPG RWGQADMACA GVQVRGARDI
IPALEATVGP MRADGGFSYA LAPPRAGALK DFRVAVWAED PHCPIDADVR RAMDDAVAAL
RAAGAHVVEQ PATIPVDMAV SHNIFQSLVF GAFAVDRSTL SPASAAALGL RAVRHPRGEA
ANALGATLQS HRAWLFADAA RHEMRDRWAG FFNEFDVLLL PVTPTPAPLH HNKDHDRLGR
TIDVDGVSRS YWDQLKWNAL ANIAGTPATT MPITTTATGL PIGIQAMGPA GGDRTTVEFA
ALLTEVLGGF RVPPL
|
|---|
| |