Gene TBFG_13182 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTBFG_13182 
Symbol 
ID5223870 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium tuberculosis F11 
KingdomBacteria 
Replicon accessionNC_009565 
Strand
Start bp3543113 
End bp3544261 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content62% 
IMG OID640607950 
Productdioxygenase 
Protein accessionYP_001289109 
Protein GI148824355 
COG category[P] Inorganic ion transport and metabolism
[R] General function prediction only 
COG ID[COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones245 
Plasmid unclonability p-value0.000000395149 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones211 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTATCAA CTGATAACCG AGCCGAGCTC GGAGACATCC TTACCGACAT CGGGGATTAC 
CTCGACGACA ATCCACCGGC GCTAAGCCTG CCGCCGGCCG CCTACACCTC ATCGGAGCTG
TGGCAGCTGG AGCGGGAACG GATCTTCAAC CGGTCCTGGA TGCTTGTCGC GCATGTCGAC
CAAGTCGCCA AGACCGGTGA CTACGTCACC GTGTCCGTCG CAGGGGAGCC GGTCATGGTG
GTGCGGGACG TCGACGGGCA GCTGCACGCT CTTTCGCCGA TCTGCCGGCA CCGGTTGATG
CTGATGGTGG AACCCGGTGC GGGGCGCATC GACACGTTGA CCTGCCAATA CCACCTGTGG
CGCTATGGGC TGGATGGCCG GTTGCGCGGA GCGCCCCATA TGGCCGCCAA CTTAGACTTC
AACCGTAGGG AGTGCCGGCT TCCGCAGTTC GCCGTGGCCA CCTGGAATGG ATTGGTGTGG
ATCAACCTGG ATGCCGATGC CGAACCAATC GCGGCGCATC TGGACCTGAC TGACGACGAA
TTCGCCGGCT ATCGGCTCGG TGAGATGGTG CAGGTCGAGT CGTGGTCGCA TGAGTGGCGA
GCTAATTGGA AGGTGGCGGC GGAAAATGGT CATGAGAACT ACCACGTGCT CGGCCTGCAT
CGCCAAACCC TGGAGCCGTT CGTTCCTGGT GGGGGCGATC TGGACGTTCG GCAGTATTCG
CGGTGGGCGT TGCGCCTCAG GGTTCCCTTC ACCGTTCCAG TAGAAGCGAA GTCGTTGCAG
CTCAACGAGG TTCAGAAAAG TAATCTGGTC GTGTTGTGGA CGTTTCCGAA CAGCGCGCTG
GCCATAGCGG GCGAGCGGGT GGTGTGGTTC GGCTTTATTC CGCAAAGCAT CGACCGGGTG
CAGGTGCTCG GCGGCGTGCT CACCACCCCC GAGTTAGCCG CCGATGCGGC AGCAACAGCT
CAGACGTCGC AGTTCGTGAT GGCGATGATC AATGACGAGG ACCGGCTCGG ACTGGAGGCC
GTGCAGGTTG GGGCGGGCTC GCGATTCGCC GAACGGGGTC ACCTTAGCTC GAAAGAATGG
CCCGGCATGC TCGCGTTCTA CCGGAACCTC GCCATGGCGC TGGTTGGCGA CCACCCAGGT
GCCAGCTAG
 
Protein sequence
MLSTDNRAEL GDILTDIGDY LDDNPPALSL PPAAYTSSEL WQLERERIFN RSWMLVAHVD 
QVAKTGDYVT VSVAGEPVMV VRDVDGQLHA LSPICRHRLM LMVEPGAGRI DTLTCQYHLW
RYGLDGRLRG APHMAANLDF NRRECRLPQF AVATWNGLVW INLDADAEPI AAHLDLTDDE
FAGYRLGEMV QVESWSHEWR ANWKVAAENG HENYHVLGLH RQTLEPFVPG GGDLDVRQYS
RWALRLRVPF TVPVEAKSLQ LNEVQKSNLV VLWTFPNSAL AIAGERVVWF GFIPQSIDRV
QVLGGVLTTP ELAADAAATA QTSQFVMAMI NDEDRLGLEA VQVGAGSRFA ERGHLSSKEW
PGMLAFYRNL AMALVGDHPG AS