Gene TBFG_13179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTBFG_13179 
Symbol 
ID5223867 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium tuberculosis F11 
KingdomBacteria 
Replicon accessionNC_009565 
Strand
Start bp3538913 
End bp3540508 
Gene Length1596 bp 
Protein Length531 aa 
Translation table11 
GC content65% 
IMG OID640607947 
ProductNADH dehydrogenase subunit N 
Protein accessionYP_001289106 
Protein GI148824352 
COG category[C] Energy production and conversion 
COG ID[COG1007] NADH:ubiquinone oxidoreductase subunit 2 (chain N) 
TIGRFAM ID[TIGR01770] proton-translocating NADH-quinone oxidoreductase, chain N 


Plasmid Coverage information

Num covering plasmid clones191 
Plasmid unclonability p-value0.0000000000788035 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones217 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCTGC CCGCCCCGCA CGTCGAGTAC TTCCTGCTCG CTCCGATGCT CATCGTCTTT 
TCGGTTGCGG TCGCCGGTGT GCTGGCCGAG GCTTTCCTGC CGCGCCGGTG GCGCTATGGC
GCCCAAGTGA CGCTCGCCCT TGGCGGGTCG GCAGTGGCAC TCATCGCGGT CATCGTGGTG
GCCAGGTCGA TTCACGGGTC GGGTCACGCC GCGGTGCTGG GGGCCATAGC CGTGGATCGA
GCGACCCTGT TTCTGCAAGG CACCGTACTA CTGGTCACGA TCATGGCAGT CGTCTTCATG
GCCGAACGCA GCGCCCGGGT GAGTCCGCAA CGCCAGAACA CCCTCGCTGT GGCGCGGCTC
CCTGGACTCG ATTCGTTTAC CCCGCAGGCT TCCGCCGTGC CCGGCAGCGA TGCTGAGCGC
CAAGCGGAAC GGGCGGGAGC CACCCAGACG GAACTTTTCC CGCTGGCGAT GCTGTCCGTC
GGCGGCATGA TGGTGTTTCC CGCGTCCAAC GACCTGTTGA CGATGTTCGT TGCGCTGGAG
GTGCTATCGC TGCCGCTGTA CCTGATGTGT GGGCTGGCCC GGAATCGCCG CCTGCTGTCG
CAGGAAGCCG CGATGAAGTA CTTCCTGCTG GGCGCCTTCT CGTCGGCGTT CTTCCTCTAC
GGCGTCGCGT TGCTATACGG CGCGACCGGC ACGCTGACCT TGCCGGGTAT TCGGGATGCG
TTGGCAGCGC GCACCGACGA CTCAATGGCG TTGGCCGGCG TCGCGCTGCT CGCGGTCGGC
CTACTATTCA AGGTCGGCGC GGTGCCATTC CACTCCTGGA TTCCCGATGT GTACCAGGGC
GCACCCACCC CGATCACCGG GTTCATGGCG GCCGCCACCA AGGTCGCGGC GTTCGGTGCG
CTGCTCCGGG TGGTCTATGT CGCGCTGCCG CCGCTGCACG ATCAGTGGCG CCCGGTGCTG
TGGGCGATTG CCATCCTCAC CATGACGGTG GGCACCGTCA CCGCGGTAAA CCAGACCAAC
GTCAAGCGTA TGCTGGCCTA TTCATCGGTC GCGCACGTCG GTTTCATACT TACCGGCGTG
ATCGCCGATA ATCCGGCGGG TCTTTCCGCG ACGTTGTTCT ATCTGGTCGC CTACAGCTTC
AGCACGATGG GTGCGTTTGC CATCGTGGGT CTGGTCCGAG GCGCCGACGG CTCAGCAGGT
TCAGAGGATG CCGACCTGTC CCACTGGGCC GGGCTGGGAC AGCGTTCACC TATCGTGGGC
GTGATGCTGT CGATGTTTCT GCTGGCCTTC GCCGGCATCC CGTTGACCAG TGGATTCGTC
AGCAAGTTCG CGGTGTTTAG GGCCGCCGCT TCCGCCGGCG CGGTGCCGCT GGTAATCGTC
GGCGTGATCT CCAGCGGCGT CGCCGCCTAC TTCTACGTGC GGGTGATCGT GAGCATGTTC
TTCACCGAAG AATCCGGTGA CACACCACAC GTGGCGGCAC CCGGCGTGCT GAGCAAGGCC
GCCATTGCGG TATGCACGGT AGTCACCGTG GTGCTGGGGA TCGCCCCGCA GCCGGTGCTC
GACCTGGCCG ACCAGGCCGC CCAGTTGCTG CGCTGA
 
Protein sequence
MILPAPHVEY FLLAPMLIVF SVAVAGVLAE AFLPRRWRYG AQVTLALGGS AVALIAVIVV 
ARSIHGSGHA AVLGAIAVDR ATLFLQGTVL LVTIMAVVFM AERSARVSPQ RQNTLAVARL
PGLDSFTPQA SAVPGSDAER QAERAGATQT ELFPLAMLSV GGMMVFPASN DLLTMFVALE
VLSLPLYLMC GLARNRRLLS QEAAMKYFLL GAFSSAFFLY GVALLYGATG TLTLPGIRDA
LAARTDDSMA LAGVALLAVG LLFKVGAVPF HSWIPDVYQG APTPITGFMA AATKVAAFGA
LLRVVYVALP PLHDQWRPVL WAIAILTMTV GTVTAVNQTN VKRMLAYSSV AHVGFILTGV
IADNPAGLSA TLFYLVAYSF STMGAFAIVG LVRGADGSAG SEDADLSHWA GLGQRSPIVG
VMLSMFLLAF AGIPLTSGFV SKFAVFRAAA SAGAVPLVIV GVISSGVAAY FYVRVIVSMF
FTEESGDTPH VAAPGVLSKA AIAVCTVVTV VLGIAPQPVL DLADQAAQLL R