| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TBFG_13099 |
|---|
| Symbol | |
|---|
| ID | 5223788 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium tuberculosis F11 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009565 |
|---|
| Strand | - |
|---|
| Start bp | 3459168 |
|---|
| End bp | 3460190 |
|---|
| Gene Length | 1023 bp |
|---|
| Protein Length | 340 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640607868 |
|---|
| Product | virulence-regulating transcriptional regulator VirS |
|---|
| Protein accession | YP_001289028 |
|---|
| Protein GI | 148824274 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 354 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 213 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGCTGG GCAGCCTCAT CCGCGCCACC AACCTGTGGG GGTACACCGA CCTGATGCGC
GAGCTCGGCG CGGACCCGCT GCCGTTTCTG CGGCGCTTCG ACATCCCGCC GGGCATCGAA
CACCAAGAGG ACGCGTTCAT GTCGCTGGCC GGGTTCGTGC GCATGCTGGA GGCCAGCGCC
GCCGAGCTCG ATTGCCCGGA CTTCGGACTA CGCCTTGCAC GCTGGCAGGG CCTGGGCATT
CTCGGCCCGG TAGCGGTGAT CGCGCGCAAC GCTGCCACCT TGTTCGGCGG GCTGGAGGCG
ATCGGTCGCT ACCTCTACGT CCATTCGCCC GCCCTGACGC TGACGGTTTC ATCAACTACC
GCACGGTCCA ACGTCCGGTT CGGCTATGAG GTGACCGAAC CGGGGATTCC CTATCCGCTG
CAGGGATACG AGCTGAGCAT GGCCAACGCC GCCCGGATGA TCCGCCTGCT GGGCGGACCG
CAGGCGCGGG CGCGCGTTTT CTCGTTCCGA CATGCGCAAC TGGGCACCGA CGCCGCCTAC
CGCGAAGCGT TGGGTTGTAC CGTTCGGTTC GGCCGGACAT GGTGCGGGTT CGAGGTGGAC
CACCGGCTCG CCGGTAGGCC CATCGACCAT GCGGATCCGG AAACCAAGCG CATCGCCACG
AAATATTTGG AATCCCAATA CCTTCCGAGC GATGCCACGC TCTCCGAGCG GGTCGTCGGG
TTGGCCCGCC GCCTGCTGCC GACCGGCCAA TGCAGCGCCG AGGCCATCGC CGACCAACTC
GACATGCACC CACGAACGCT GCAGCGGCGC TTGGCTGCCG AGGGCCTCCG GTGCCATGAC
CTCATCGAGC GCGAACGCCG TGCGCAAGCG GCAAGGTACC TCGCCCAACC GGGGTTGTAT
CTGAGCCAAA TCGCGGTGCT GCTCGGCTAT TCCGAGCAGA GCGCGCTCAA CCGGTCGTGC
CGGCGCTGGT TTGGGATGAC ACCCCGGCAG TATCGAGCCT ATGGTGGGGT CAGCGGTCGG
TGA
|
|---|
| Protein sequence | MELGSLIRAT NLWGYTDLMR ELGADPLPFL RRFDIPPGIE HQEDAFMSLA GFVRMLEASA
AELDCPDFGL RLARWQGLGI LGPVAVIARN AATLFGGLEA IGRYLYVHSP ALTLTVSSTT
ARSNVRFGYE VTEPGIPYPL QGYELSMANA ARMIRLLGGP QARARVFSFR HAQLGTDAAY
REALGCTVRF GRTWCGFEVD HRLAGRPIDH ADPETKRIAT KYLESQYLPS DATLSERVVG
LARRLLPTGQ CSAEAIADQL DMHPRTLQRR LAAEGLRCHD LIERERRAQA ARYLAQPGLY
LSQIAVLLGY SEQSALNRSC RRWFGMTPRQ YRAYGGVSGR
|
|---|
| |