| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TBFG_13024 |
|---|
| Symbol | gatB |
|---|
| ID | 5223712 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium tuberculosis F11 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009565 |
|---|
| Strand | - |
|---|
| Start bp | 3378973 |
|---|
| End bp | 3380502 |
|---|
| Gene Length | 1530 bp |
|---|
| Protein Length | 509 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640607792 |
|---|
| Product | aspartyl/glutamyl-tRNA amidotransferase subunit B |
|---|
| Protein accession | YP_001288953 |
|---|
| Protein GI | 148824199 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0064] Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) |
|---|
| TIGRFAM ID | [TIGR00133] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 284 |
|---|
| Plasmid unclonability p-value | 0.293215 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 203 |
|---|
| Fosmid unclonability p-value | 0.59302 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGTTG CTGCCGGGGC AGCCAAGGCC GCAGGGGCTG AACTGCTCGA TTACGACGAG
GTCGTCGCGC GCTTCCAGCC GGTACTCGGC CTCGAGGTGC ACGTCGAGCT GTCCACTGCG
ACCAAGATGT TCTGTGGCTG CACCACCACA TTCGGCGGCG AGCCAAACAC CCAGGTGTGT
CCGGTGTGTC TGGGCTTGCC CGGTTCGCTG CCGGTGCTCA ACCGGGCCGC CGTGGAGTCG
GCGATCCGCA TCGGGCTGGC GCTGAACTGC GAGATCGTAC CCTGGTGTCG CTTCGCCCGG
AAGAACTACT TCTACCCCGA CATGCCCAAG AACTACCAGA TCTCACAGTA CGACGAGCCG
ATCGCCATCA ACGGCTACCT GGACGCGCCT TTGGAAGACG GCACCACTTG GCGGGTGGAG
ATTGAGCGAG CTCACATGGA AGAAGACACC GGCAAGCTCA CCCACATCGG CAGCGAGACG
GGCCGGATCC ACGGTGCCAC CGGTTCGCTG ATCGACTACA ACCGTGCCGG CGTGCCGCTC
ATCGAGATCG TCACCAAACC CATCGTGGGC GCCGGTGCCC GGGCGCCGCA GATCGCCCGG
TCCTATGTGA CGGCGTTGCG GGATCTGCTG CGCGCATTAG ATGTATCTGA TGTCCGGATG
GACCAGGGTT CGATGCGCTG TGACGCCAAC GTGTCGCTGA AGCCGGCCGG GACGACCGAA
TTCGGCACCC GGACCGAGAC CAAGAACGTC AACTCGCTGA AGAGCGTCGA AGTCGCCGTC
CGCTACGAAA TGCAGCGCCA GGGCGCTATT TTGGCGTCTG GTGGTCGGAT CACCCAGGAA
ACCAGACACT TTCACGAGGC CGGTTACACC AGCGCGGGCC GCACCAAGGA GACCGCCGAG
GACTATCGGT ACTTCCCGGA GCCGGATTTG GAGCCTGTCG CGCCCAGTCG CGAGCTGGTC
GAGCGACTAC GCCAGACGAT CCCCGAATTG CCGTGGTTGA GCCGCAGGAG GATTCAGCAG
GAGTGGGGTG TTTCCGACGA GGTGATGCGC GATCTGGTCA ACGCCGGCGC CGTCGAATTG
GTTGCTGCCA CCGTCGAGCA CGGCGCGTCC AGCGAGGCGG CGCGCGCCTG GTGGGGAAAC
TTCCTGGCGC AAAAGGCCAA CGAGGCCGGC ATCGGGCTGG ACGAACTGGC CATCACTCCT
GCCCAGGTCG CAGCCGTGGT GGCATTGGTC GATGAGGGCA AGCTGTCCAA CAGCTTGGCC
CGCCAAGTCG TGGAGGGTGT GCTGGCCGGT GAAGGTGAGC CCGAACAGGT GATGACTGCG
AGAGGGTTGG CGTTGGTCCG CGACGACTCG TTGACCCAGG CCGCGGTCGA CGAGGCCCTG
GCCGCAAATC CTGATGTGGC GGACAAGATT CGCGGCGGCA AGGTGGCCGC GGCCGGCGCG
ATTGTCGGTG CGGTGATGAA GGCGACCCGC GGACAGGCCG ACGCGGCCCG AGTGCGCGAA
CTCGTTCTAG AGGCCTGCGG GCAGGGTTAG
|
|---|
| Protein sequence | MTVAAGAAKA AGAELLDYDE VVARFQPVLG LEVHVELSTA TKMFCGCTTT FGGEPNTQVC
PVCLGLPGSL PVLNRAAVES AIRIGLALNC EIVPWCRFAR KNYFYPDMPK NYQISQYDEP
IAINGYLDAP LEDGTTWRVE IERAHMEEDT GKLTHIGSET GRIHGATGSL IDYNRAGVPL
IEIVTKPIVG AGARAPQIAR SYVTALRDLL RALDVSDVRM DQGSMRCDAN VSLKPAGTTE
FGTRTETKNV NSLKSVEVAV RYEMQRQGAI LASGGRITQE TRHFHEAGYT SAGRTKETAE
DYRYFPEPDL EPVAPSRELV ERLRQTIPEL PWLSRRRIQQ EWGVSDEVMR DLVNAGAVEL
VAATVEHGAS SEAARAWWGN FLAQKANEAG IGLDELAITP AQVAAVVALV DEGKLSNSLA
RQVVEGVLAG EGEPEQVMTA RGLALVRDDS LTQAAVDEAL AANPDVADKI RGGKVAAAGA
IVGAVMKATR GQADAARVRE LVLEACGQG
|
|---|
| |